Aminobacter niigataensis: AMD1_1042
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Entry
AMD1_1042 CDS
T09606
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
anj
Aminobacter niigataensis
Pathway
anj00300
Lysine biosynthesis
anj00470
D-Amino acid metabolism
anj01100
Metabolic pathways
anj01110
Biosynthesis of secondary metabolites
anj01120
Microbial metabolism in diverse environments
anj01230
Biosynthesis of amino acids
Module
anj_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AMD1_1042 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AMD1_1042 (dapF)
Enzymes [BR:
anj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
AMD1_1042 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
CAI2932324
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All DBs
Position
AMD1:1028140..1029024
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AA seq
294 aa
AA seq
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MASEAPFAKMNGLGNEIIVADMRGRTDRVAPAAAIALAADPATKFDQIMAIHDPRTPGTV
NYIEIINADGSHAQACGNGTRCVVQALAAEAGQKVFTFETVAGILNAEEHADGSISVDMG
APRFGWQDIPLAEEFRDTRAIELQIGPIDAPVLHSPSVASMGNPHAIFWVDNDVWSYDLD
RFGPLLENHPIFPERANISIAQVTSRETLNLRTWERGAGLTLACGSATCAAAVSAARTGR
TGRTVTVTVPSGGTLQIDWRADDHVVMTGPAEWEFSGSFDPATGDWTRDRQDVA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgaggccccattcgccaagatgaacgggctcggcaacgagatcatcgttgcc
gacatgcgcggtcgcacggaccgtgttgcgcccgccgcggcgattgcgctcgccgccgat
ccggcgacgaagttcgaccagatcatggcgatccatgacccgcgcacgccgggcacggtc
aactacatcgagatcatcaacgccgacggcagccatgcccaggcctgcggcaacggcacg
cgctgcgtcgtccaggcgctggccgccgaagccgggcagaaggtcttcaccttcgagacc
gtcgccggcatcctcaacgccgaagagcacgcggacggctccatttccgtcgacatgggc
gccccgcgcttcggctggcaggacattccgctggcggaagagttccgcgacacgcgcgcc
atcgagctgcagatcggcccgatcgacgcgccggtgctgcactcgccgtcggtcgcctcg
atgggcaatccgcacgccatcttctgggtcgacaacgacgtctggtcctatgacctcgac
cgtttcggccccctgctggaaaaccacccgatcttccccgagcgcgccaacatatcgatc
gcgcaggtgacgtcgcgcgaaacgctgaacctgcgcacctgggagcgcggcgccggcctg
acgctggcctgcggctcggcaacttgcgccgctgccgtctccgccgcacgcaccggccgc
accggccgcaccgtcacggtcaccgtgccgagcggcggcactctccagatcgactggcgc
gccgacgaccacgtggtgatgaccggtccggccgagtgggaattctccggcagtttcgat
ccggccaccggcgactggacccgcgaccggcaggacgtcgcctga
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