Aminobacter niigataensis: AMD1_1087
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Entry
AMD1_1087 CDS
T09606
Symbol
sdhA
Name
(GenBank) succinate:quinone oxidoreductase, FAD binding protein
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
anj
Aminobacter niigataensis
Pathway
anj00020
Citrate cycle (TCA cycle)
anj00190
Oxidative phosphorylation
anj00650
Butanoate metabolism
anj00720
Other carbon fixation pathways
anj01100
Metabolic pathways
anj01110
Biosynthesis of secondary metabolites
anj01120
Microbial metabolism in diverse environments
anj01200
Carbon metabolism
Module
anj_M00009
Citrate cycle (TCA cycle, Krebs cycle)
anj_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
anj_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AMD1_1087 (sdhA)
00650 Butanoate metabolism
AMD1_1087 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
AMD1_1087 (sdhA)
00720 Other carbon fixation pathways
AMD1_1087 (sdhA)
Enzymes [BR:
anj01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
AMD1_1087 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
Pyr_redox_2
Thi4
FAD_binding_3
HI0933_like
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
CAI2932369
LinkDB
All DBs
Position
AMD1:1067400..1069235
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AA seq
611 aa
AA seq
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MAKDGKTSGASAYTFVDHKFDVVVVGAGGAGLRATLGMAEQGLKTACITKVFPTRSHTVA
AQGGIAASLQNMGPDSWQWHMYDTVKGSDWLGDMDAMEYLVREAPAAVYELEHYGVPFSR
TEEGKIYQRPFGGHMMNYGDGPPVQRTCAAADRTGHAILHTLYGQSLKHNAQFFIEYFAL
DLIMEPDGTCTGVVAWNLDDGTIHRFSAKMVVLATGGYGRAYFSATSAHTCTGDGGGMAS
RAGLPLQDMEFVQFHPTGIYGSGCLITEGARGEGGYLVNAEGERFMERYAPSAKDLASRD
VVSRCMTLEIRDGRGVGKNKDHIFLHLDHLDPAVLHERLPGISESAKIFAGVDVTREPIP
VLPTVHYNMGGIPTNYWGEVLNPTAGNPDRVSPGLMAVGEAGCASVHGANRLGSNSLIDL
VVFGRAAAIRAGEVVDRNAPIPSPNAASVEKIMDRFDRLRHANGGTPTAVLREKMQRAMQ
EDAAVFRTQESLEQGCKRISQIWGEMKDIKVFDRSMIWNSDLVETLELENLMSNAIATVY
GAEARKESRGAHAREDFSARDDANWRKHTLATVAEDGEVTLTYRPVHTEPLLKEEDGGIS
LAKIAPKARVY
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
gtggccaaggacggcaagaccagcggagcatccgcctacacattcgtcgatcacaagttc
gacgtcgtcgttgtcggcgccggcggtgcgggcctgcgcgccacgctcggcatggccgag
caggggctgaagaccgcctgcatcaccaaggtgttcccgacccgctcgcacaccgttgcg
gcgcagggcggcatcgctgcctcgctgcagaacatggggcccgactcctggcagtggcac
atgtacgataccgtcaagggctcggactggctcggcgacatggacgccatggaatacctg
gtgcgcgaagcgccagccgcagtctacgagctcgagcattacggcgtgccgttctcgcgc
accgaagaaggcaagatctaccagcgcccgttcggcggccacatgatgaactacggcgac
ggcccgcccgtgcagcgcacatgcgccgctgccgaccgcactggccacgccatcctgcac
acgctctacggccagtcgctcaagcacaacgcgcagttcttcatcgagtatttcgcactc
gacctgatcatggagccggacggcacctgcaccggcgtcgtggcctggaacctcgacgac
ggcaccatccaccgcttctcggcgaagatggttgtattggcgaccggcggctacggccgc
gcctatttctccgccacgtcggcccatacctgcaccggcgacggcggcggcatggcctcg
cgtgccggcctgccgctgcaggacatggagttcgtgcagttccacccgaccggcatctac
ggttcgggctgcctgatcaccgaaggcgctcgcggcgaaggcggctatctcgtcaacgcc
gagggcgagcgcttcatggagcgctacgcgccgtcggccaaggacctggcgtcgcgcgac
gtggtttcgcgctgcatgacgctggagattcgtgacggtcgcggcgtcggcaagaacaag
gaccacatcttcctgcacctcgatcacctcgatccggcggtgctgcacgagcggctgccc
ggcatctcggaatcggcgaagatcttcgccggcgtcgacgtgacccgcgagccgatcccg
gtgctgccgacggtgcactacaacatgggcggcatcccgaccaactactggggcgaggtg
ctgaacccgaccgcgggcaaccccgaccgcgtgtcgcccggcctgatggccgtcggcgag
gctggctgcgcttcggtgcacggggccaaccgcctcggctccaactcgctgatcgatctg
gtggtgttcggccgcgccgcagccatccgcgccggcgaagtggtcgatcgcaacgcgccg
atcccgtcgccgaacgcggcctcggtcgaaaagatcatggaccgcttcgaccgcctgcgt
cacgccaatggcggcacgccgacggcggtgctgcgtgagaagatgcagcgcgcgatgcag
gaagacgctgccgtgttccgcacccaggagtcgctggagcagggctgcaagcgcatctcc
cagatctggggcgagatgaaggacatcaaggtcttcgaccgctcgatgatctggaactcg
gacctggtggagacgctggaactcgagaacctgatgtcgaatgcgatcgccaccgtctat
ggcgccgaagcgcgcaaggaaagccgcggcgcgcatgcccgcgaggacttctcggcccgc
gacgacgccaactggcgcaagcacacgctggccaccgtcgccgaggatggcgaggtgacg
ctgacctaccggccggtgcacaccgagccgctgctcaaggaagaagacggcggcatcagc
ctggcaaagatcgcgccgaaggcgcgggtgtactga
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