Aminobacter niigataensis: AMD1_1250
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Entry
AMD1_1250 CDS
T09606
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
anj
Aminobacter niigataensis
Pathway
anj00521
Streptomycin biosynthesis
anj00523
Polyketide sugar unit biosynthesis
anj00541
Biosynthesis of various nucleotide sugars
anj01100
Metabolic pathways
anj01110
Biosynthesis of secondary metabolites
anj01250
Biosynthesis of nucleotide sugars
Module
anj_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
AMD1_1250 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
AMD1_1250 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
AMD1_1250 (rfbC)
Enzymes [BR:
anj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
AMD1_1250 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CAI2932532
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All DBs
Position
AMD1:1206153..1206716
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AA seq
187 aa
AA seq
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MVEVRELGLDGVCEIQPAKIEDARGFFSETWNAAKLAHAGIAVDFVQDNQSFSRARGVMR
GLHFQTPPFAQDKLVRVLRGSIFDVAVDIRKGSPSFGNWVGLTLSDKDWNQILVPKGFAH
GFVTLEPNTEVVYKVSAPYSQPHDRSIRFDDPDIGIEWPLAAAEMVLSSKDATAPYLAEV
ETGFVYA
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggttgaggtgcgagagctcgggctggatggtgtttgcgagatccagccagccaagatc
gaggatgcgcgcgggttcttttccgagacatggaacgcggcaaaactggcgcacgccggt
atcgcggtggactttgtgcaagacaaccaatccttttcgcgggctcgcggcgtgatgcgg
gggttgcatttccaaacgccacccttcgcgcaggacaagctggtgcgcgtgctgcggggg
tcgatcttcgacgttgcggtcgacataagaaaaggttcgccgagcttcggcaactgggtc
gggctgaccctctcggacaaggactggaaccagatcctggtgcccaaggggttcgcgcac
ggctttgtcacactcgagccgaacaccgaggtcgtctacaaggtttctgccccttattcg
cagccgcatgaccggtcgatccgcttcgacgatcccgacatcgggatcgaatggccgctg
gctgccgcggagatggtgctgtccagcaaggacgcgacggcaccctatctggccgaagtc
gaaaccgggttcgtatacgcatga
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