Aminobacter niigataensis: AMD1_1537
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Entry
AMD1_1537 CDS
T09606
Symbol
ku
Name
(GenBank) Non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
anj
Aminobacter niigataensis
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AMD1_1537 (ku)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
anj03400
]
AMD1_1537 (ku)
DNA repair and recombination proteins [BR:
anj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
AMD1_1537 (ku)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
C2-set
Motif
Other DBs
NCBI-ProteinID:
CAI2932819
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All DBs
Position
AMD1:complement(1458166..1459038)
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AA seq
290 aa
AA seq
DB search
MAPRASWKGYLKLSLVSCPVRLYPATSSSERISFNQLHKDTHNRINMKPVDPELGLVERT
DLVKGYEYEDKRYVIIDEADLDSVRIESNHTMNIEAFVDEHSVDVIYQDAPYYLAPDGAM
AEETFAVLREALHKSGKLAIARLVLSSRERVVTIGARDKGMFVCTLRNPSEVRSTAEYFS
NIPAGKPDPEMLELAEALIKQKLTTFDPKNYEDRYEIALMNMIKEKLKGHKPIIAAAPER
GNVINLMDALKASLGQAKPPAKSKTKAEPAEKPAAKLTAIAGGKQAKGKK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggcccccagggcaagttggaagggatatctgaagctcagcctcgtcagctgcccggtg
cggctgtacccggcaacgagttccagcgagcgcatcagcttcaatcagttgcacaaggac
acccacaaccggatcaacatgaagccggtcgatccggagctcggcctcgtcgaacgtacc
gacctggtcaagggctacgaatacgaagacaagagatacgtcatcatcgacgaagccgac
ctcgacagcgtcaggatcgaatccaaccacacgatgaacatcgaggcctttgtcgacgag
cattccgtcgacgtcatctaccaggacgcgccctactatcttgcccccgacggagccatg
gcggaggaaacattcgccgtgctgcgcgaggcgctgcacaagtccggcaagctggcgatc
gcgcggctggtgctgtcgagccgcgaacgcgtggtcaccatcggcgcgcgcgacaagggt
atgttcgtctgcacgctgcgcaacccgagcgaggtgcgcagcaccgccgaatatttcagc
aacatccccgccggcaagcccgaccccgagatgctcgaactcgccgaggcgctgatcaag
cagaagctgacgaccttcgatccgaagaactacgaagaccgctacgagatcgccttgatg
aacatgatcaaggagaagctgaagggtcacaagccgatcatcgccgccgcacccgagcgc
ggcaatgtcatcaacctgatggatgcgctgaaggcgagcctcggccaggccaagccgccg
gcaaagagcaagaccaaggccgaaccggccgagaagccggcggccaagctgaccgcgatc
gcgggaggcaagcaggccaagggcaagaagtga
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