Aminobacter niigataensis: AMD1_1982
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Entry
AMD1_1982 CDS
T09606
Symbol
ydcS
Name
(GenBank) putative ABC transporter periplasmic binding protein/polyhydroxybutyrate synthase
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
anj
Aminobacter niigataensis
Pathway
anj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AMD1_1982 (ydcS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
anj02000
]
AMD1_1982 (ydcS)
Transporters [BR:
anj02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
AMD1_1982 (ydcS)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Ral
Phosphonate-bd
Motif
Other DBs
NCBI-ProteinID:
CAI2933256
LinkDB
All DBs
Position
AMD1:1892916..1894070
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AA seq
384 aa
AA seq
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MKAFLKSCTAIALACSFSGQAVAQVKEIGKAEGQVNIIAWPGYIERGETDKNYDWVSDFE
KASGCKVNVKTAATSDEMVALMNEGGFDLVTASGDASLRLVAGKRVQPINTDLVKSWSTV
DERLKDAPWFTVDGQHYGVPYQWGPNVLMYNTDVFKEAPKSWSVVFEPMDLPDGKPNKGR
VQAYDGPIHIADAANYLMAHKPDLGIKDPYELNEDQYKAALDLLRVQRTLAGRYWHDAMI
QIDDFKNEGVVASGSWPFQVNLLKSEKQPIASTIPEEGATGWADTTMMHVEAANPNCAYM
WLEHSLNPKLQGDLASWFGSNPAVPAACKGNALLTDEGCKTNGFEDFARIKFWKTPVSKC
ASQNDQCVPYYRWVSDYIGVIGGR
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcatttctgaaatcctgcacggcaatcgccttggcttgcagcttttccggccag
gcggtggcgcaggtcaaggagatcggcaaggccgagggccaggtcaacatcatcgcctgg
ccgggctacatcgagcgcggcgagaccgacaagaattacgactgggtcagtgatttcgag
aaggcgtcgggctgcaaggtcaacgtcaagaccgccgccacttccgacgaaatggtcgcg
ctgatgaacgagggcggcttcgacctcgtcaccgcttcgggcgacgcctcgctccgcctc
gtcgccggcaagcgtgtccagccgatcaacaccgacctcgtcaagagctggtcgaccgtc
gacgagcgcctcaaggatgcgccgtggttcaccgtcgacggccagcattacggcgtgccc
taccagtggggcccgaacgtcttgatgtacaacaccgacgtgttcaaggaagcgccgaag
agctggagcgtcgtgttcgagccgatggacctacccgacggcaagcccaacaagggccgc
gtccaggcctatgacggcccgatccatattgcggacgccgccaactacctgatggcgcac
aaacccgatctcggcatcaaggatccctacgagctcaacgaggaccagtacaaggcagcg
cttgatctgctgcgcgtgcaacgcacgctggccggccgctactggcacgatgccatgatc
cagatcgacgacttcaagaacgaaggcgtcgtcgcttccggttcgtggccgttccaggtc
aacctgctcaagtcggagaagcagccgatcgcctcgaccatcccggaagagggtgccacg
ggctgggccgatacgacgatgatgcatgtcgaagccgccaaccccaactgcgcctatatg
tggctcgagcattcgctgaaccccaagctgcagggcgatcttgcctcctggttcggctct
aacccggcagtaccagccgcctgcaagggcaacgcgctgctcaccgacgagggttgcaag
accaacggcttcgaggacttcgccaggatcaagttctggaagacgccggtgtcgaaatgc
gccagccagaacgaccagtgcgtaccctattatcgctgggtctcggactatatcggcgtg
atcggcggccgctga
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integrated database retrieval system
