Aminobacter niigataensis: AMD1_1983
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Entry
AMD1_1983 CDS
T09606
Symbol
ydcT
Name
(GenBank) putative ABC transporter ATP-binding protein YdcT
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
anj
Aminobacter niigataensis
Pathway
anj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AMD1_1983 (ydcT)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
anj02000
]
AMD1_1983 (ydcT)
Transporters [BR:
anj02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
AMD1_1983 (ydcT)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA_22
ABC_ATPase
AAA
AAA_29
nSTAND_NTPase5
MIT_C
DUF8759
Motif
Other DBs
NCBI-ProteinID:
CAI2933257
LinkDB
All DBs
Position
AMD1:1894283..1895281
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AA seq
332 aa
AA seq
DB search
MTPAVAFQKTSRHFGAVRAVDAVDLEIKPGEFFAMLGPSGSGKTTCLRLIAGFEQPTSGS
ISIFGERAEGVPPYRRNVNTVFQDYALFPHLNVLDNVAYGLMVKGMGKDERHRAAEDALK
LVQLPGYGSRKPGQLSGGQRQRVALARALVNKPKVLLLDEPLGALDLKLRESMQEELKQL
QKALGITFVFVTHDQGEALSMADRVAVFNDGRIMQVGAPEDIYQRPASRFVADFVGSSNV
LPPDFVQRYAGQRRWGSLRPEQIRVGRDKSGDGVAARVLSRHYLGAATKLALDADGLRLH
ATVPAGASLPDDGEHVMLSFNRDQLHLMEEQA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaccccagcagtcgcctttcaaaagacctcccgccatttcggcgcggtgcgcgcggtc
gatgctgtcgacctcgagatcaagcctggcgagttcttcgccatgctgggaccgtctggc
tcgggcaagaccacttgcttgcgtttgatcgccggcttcgagcagccgacatcgggcagt
atctcgatcttcggcgagcgcgccgagggcgtgccgccttaccggcgtaacgtcaacacg
gtgttccaggactacgcgctgtttccgcatctcaacgtgctcgacaacgtcgcctacggg
ttgatggtcaagggcatgggaaaggacgaacgccaccgcgccgccgaggacgcactcaag
ctggtgcaactgccgggctatggcagccgtaagccgggccagctgtccggcggtcagcgg
cagcgcgtggcgctggcgcgtgcgctggtcaacaagcccaaggtgctgctgctcgacgag
ccgctcggcgcgctcgacctcaagctgcgcgagagcatgcaggaagagctcaagcaattg
caaaaggcgctcggcatcaccttcgtcttcgtcacgcacgaccagggcgaggcgctgtcc
atggccgaccgggtcgcggtcttcaacgacggccgcatcatgcaggtcggcgcgcccgag
gacatctaccagcgcccggcgtcgcgcttcgtcgccgatttcgtcggctcgtccaacgtg
ctgccgcccgatttcgtgcagcgttatgccggccagcgccgctggggcagcctcaggccg
gaacagatccgcgtcggtcgcgacaagagcggcgacggcgtcgctgcccgcgtcctgtcg
cgtcactatctgggtgcggccaccaagctggcgcttgatgccgatggcctccggctgcac
gccacggtgccggccggcgcttcgctgcccgacgatggcgagcatgtcatgctcagcttc
aaccgcgaccagctccacctgatggaggagcaggcatga
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integrated database retrieval system
