Aminobacter niigataensis: AMD1_2286
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Entry
AMD1_2286 CDS
T09606
Name
(GenBank) tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
anj
Aminobacter niigataensis
Pathway
anj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMD1_2286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anj03019
]
AMD1_2286
Enzymes [BR:
anj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
AMD1_2286
Messenger RNA biogenesis [BR:
anj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AMD1_2286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
CAI2933560
LinkDB
All DBs
Position
AMD1:2195101..2196357
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AA seq
418 aa
AA seq
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MSATIAGASWLNDPQLQKLLAVLNADGEEARIAGGAVRNALLGEPVADVDIATTNLPEET
VRRAEAAGFKTVPTGAEHGTITVIAGGRPFEVTTLRADVETDGRRAKVVFGRDWKLDAER
RDFTINALYAKADGTVVDLVGGLADLEGRILRFIGDAETRIREDYLRILRFFRFFAWYGK
GRPDAEGLKACARLKDGLSRLSAERVWSELKRLLAASDPSRALLWMRQAGVLTAALPESE
KWGIDAIHALVRAENDLGWAADPLLRLASIVPPDAVRMKTLGERLRLSNSETDRLVQWAA
TAKVEAAVSEGELAKRLYRGNVEGFRDRLRLDLAAARGRAEQDDKALIEAGGYFRLLTFA
DKWQKPDFPLRGGDLSELGVEGAALGALLKHLETEWVDSGFSLGRDALLGRAAARLKA
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaacgatcgccggagcctcttggctgaacgatccgcagttgcagaaactgctc
gcagtcctcaatgccgatggcgaagaagcgcgcatcgccgggggggctgtgcgcaacgca
ctgctcggcgaacccgtcgccgatgtcgacatcgccaccaccaatttgccggaagagacc
gttcgccgtgccgaggcagccggcttcaagaccgtgcccaccggcgccgagcacggcacg
atcacggtcatcgccggcggcaggccgttcgaggtcaccacgctgcgtgccgatgtcgag
accgatggccgccgcgccaaggtcgtcttcggccgcgactggaagctcgacgccgagcgg
cgcgacttcaccatcaatgcgctttacgccaaggccgacggcacggtggtcgatctggtc
ggcgggcttgccgatctcgaaggccggatcctgcgcttcatcggcgacgccgaaacccgc
atccgcgaggactatctgcgcatcctgcgcttcttccgcttcttcgcctggtacggcaag
ggccgccctgatgccgaagggctgaaggcctgcgcgcggctcaaggacgggctttcccgg
ctgtccgccgagcgcgtctggtcggagttgaagcggctgcttgcggcctccgatccgtcg
cgcgcgctgttgtggatgcgccaggccggcgtgctgacggcagcgctgccggaaagcgag
aaatggggcatcgacgccatccatgcgctcgtcagggcggaaaacgatctcggctgggct
gccgatccgctgctgcgcctggcatcgatcgtgccgccggatgcggtgcgcatgaagacg
cttggcgagcggctccggctgtccaattccgagaccgacaggctggtgcagtgggcggcg
acagcgaaggtggaagcggctgtctccgaaggcgaactggccaagcggctttatcgcggc
aatgtcgaaggtttcagggaccgcctgcgtctcgatctcgccgcggcgcggggccgcgcc
gagcaggacgacaaggcgttgatcgaagccggcggctatttccggctgctcacctttgcg
gacaaatggcagaagcctgatttcccgctgcgcggcggcgatctgtcagagcttggcgtc
gagggtgctgcccttggcgcgctgctcaagcatctggaaacggagtgggtcgacagcggc
ttttcgctggggcgcgacgcgctgctcgggcgcgccgctgcaaggctcaaggcctga
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