Aminobacter niigataensis: AMD1_2370
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Entry
AMD1_2370 CDS
T09606
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
anj
Aminobacter niigataensis
Pathway
anj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AMD1_2370 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
anj03400
]
AMD1_2370 (uvrB)
DNA repair and recombination proteins [BR:
anj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AMD1_2370 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AMD1_2370 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
SWI2_SNF2
Microtub_bd
DUF87
DUF2963
Motif
Other DBs
NCBI-ProteinID:
CAI2933644
LinkDB
All DBs
Position
AMD1:complement(2265204..2268257)
Genome browser
AA seq
1017 aa
AA seq
DB search
MAKSADKKSPTSGADNRAAPRKRGGNGVTDFLNASEPLHRPGFGEAPQAELSGAPLSGSI
SDWAEEIAREAEKPQPKAKKIPEKSSAPTRSARGTSMGGAASAKDRAAAGLNPVAGLDIS
LEDAASLSNSGVTATVAALSALIESGNPLHKNGEIWVPHRPARPEKSEGGIQIVMQSEFE
PAGDQPTAIKDLVEGVNSTERTQVLLGVTGSGKTFTMAKVIEETQRPALILAPNKTLAAQ
LYSEFKKFFPDNAVEYFVSYYDYFQPEAYVPRTDTYIEKESTINEQIDRMRHSATRSLLE
RDDVIIVASVSCIYGIGSVETYTAMTFQMAVGDRLDQRQLLADLVAQQYKRQDINFVRGS
FRVRGDTIEIFPAHLEDSAWRISLFGDEIDSITEFDPLTGQKTGDLKSVKIYANSHYVTP
RPTLNQAIKSIKEELQHRLQELEKAGRLLEAQRLEQRTRFDLEMLEATGSCAGIENYSRY
LTGRRPGDPPPTLFEYIPDNALVFIDESHVTVPQIGGMYRGDFRRKATLAEYGFRLPSCM
DNRPLRFEEWDAMRPLSVAVSATPGNWEMEEAGGVFAEQVIRPTGLIDPPVEVRPAKTQV
DDVVGEIRETTKAGYRTLVTVLTKRMAEDLTEYLHEHGVRVRYMHSDIDTLERIEILRDL
RLGAFDVLVGINLLREGLDIPECGFVAILDADKEGFLRSETSLIQTIGRAARNVDGKVIL
YADQITGSMERAMAETSRRREKQMLWNEANGITPESVKSRISDILESVYEKDHVRADISQ
FTDNAGAMMGNNLKAHLDALEKQMRNAATDLDFEKAARIRDEIKRLREMELAISDDPMAK
YADMESPASGREKGKHNKGVAKHRTVEEQERFRKLDEARAAEEAAKAARPNLFRKPDLDE
MGADGTVPAGKSLFAKPHIDDMGPGTDMTTPAGAVSRSLFKKQSAAEAHGSDYGVPEDGN
SLFKKNSLDEMTVRRTEKPVEGVKPVKRAKIGAGSYEDPAEAARARKKPGKSGRPGK
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggccaaatctgctgacaagaaatcgcccacctcgggggctgacaaccgtgccgcgccg
cgcaagcgtggcggcaatggcgtgaccgatttcctcaatgcgtccgagccgttgcatcgc
cccggcttcggcgaagcgccgcaggcggagctttcaggcgcgccgctgtccggctcgatt
tccgactgggccgaagagatcgccagagaggcagaaaagccgcagccaaaggccaagaag
atccccgaaaagagctctgcacccacacgctcggcgcgcggcacctcgatgggcggtgcc
gcctcggccaaggatcgcgccgccgccggcctcaacccggtcgccggcctcgacatctct
ctcgaagacgccgcctcgctgtccaattccggtgtcaccgcgaccgtcgccgccctgtcg
gcgctgatcgaaagcggtaacccgctgcacaagaacggcgagatctgggttccccaccgc
cctgcccggccggagaagtccgagggcggcatccagatcgtcatgcagtcggagttcgag
ccggccggcgaccagcccaccgccatcaaggatctcgtcgaaggcgtcaattcgaccgag
cgcacccaggttctgctcggcgtcaccggctcgggcaagaccttcaccatggccaaggtg
atcgaagagacgcagcgcccggcgctgatcctggcgcccaacaagacgctggccgcccag
ctctattccgaattcaagaagttcttccccgacaacgcggtcgagtatttcgtctcctat
tacgactacttccagcccgaggcctacgtcccgcgcaccgacacctatatcgagaaggaa
tcgaccatcaacgagcagatcgaccgtatgcgccactcggcgacgcgctcgctgctcgaa
cgcgacgacgtcatcatcgtcgcctcggtctcgtgcatctacggtatcggctcggtcgaa
acctataccgccatgaccttccagatggcggtcggcgaccggctcgaccagcgccagcta
ctcgccgaccttgtcgcccagcaatacaagcgccaggacatcaatttcgtccgcggctcg
ttccgcgtccgtggcgacaccatcgagatctttccggcccacttggaggactcggcctgg
cgcatttcgctgttcggcgacgagatcgactccatcactgagttcgacccgctcaccggc
cagaagactggcgacctcaaaagcgtaaaaatctacgccaactcgcactatgtgacgccg
cgcccgaccttgaatcaggccatcaagtcgatcaaggaagagctgcagcaccgcctgcaa
gagcttgaaaaggctggccgcctgctcgaggctcagcgcctggaacagcgcacccgtttc
gacctcgagatgctcgaggccaccggctcctgcgccggcatcgagaactattcgcgctat
ctcaccggccgccgccccggcgatccgccgcccaccctgttcgaatacatccccgacaac
gcgctcgtcttcatcgacgaaagccacgtcactgtgccgcagatcggcggcatgtaccgg
ggcgacttcaggcgcaaggcgacgctggccgaatacggcttccgcctgccgtcgtgcatg
gacaaccggccgctgcgcttcgaggaatgggacgccatgcgcccgctctccgtcgctgtg
tcggcgacgcccggcaactgggagatggaagaggccggcggcgtctttgccgagcaggtc
atccgcccgaccggcctgatcgacccgccggtcgaggtgcgcccggccaagacccaggtc
gacgatgtcgtcggcgaaatccgcgagacgaccaaggccggctaccgtaccctcgtcacc
gtgctgaccaagcgcatggccgaagacctgaccgaatatctgcacgagcacggcgtccgc
gtccgctacatgcactccgacatcgacacgctggagcgcatcgagatcctccgcgacctc
aggctcggcgccttcgacgtgctggtcggcatcaaccttctgcgcgaaggcctcgacatt
cccgaatgcggtttcgtcgccattctcgacgccgacaaggaaggcttcctgcgctccgag
acctcgctcatccagaccatcggccgcgcggcaagaaacgtcgatggcaaagtaatcctc
tacgccgaccagatcaccggctcgatggaacgcgccatggccgagacgtcgcgccgccgc
gaaaagcagatgttgtggaacgaggccaacggcatcacgcccgaaagcgtcaagtcgcgc
atttccgacatcctcgagtcggtctacgagaaggatcacgtccgcgccgacatctcgcag
ttcaccgacaatgccggtgcgatgatgggcaacaacctcaaggcccatctcgatgcgctc
gaaaagcagatgcgcaatgccgccaccgacctcgacttcgagaaggccgcccgcatccgc
gacgagatcaagcgcctgcgcgagatggaactggccatctcggacgacccgatggccaaa
tatgccgacatggaaagcccggcgtcggggcgcgaaaagggcaagcacaacaagggcgtg
gccaagcatcgcacggttgaggagcaggaacgcttccgcaagctcgacgaggcacgcgcc
gccgaggaggcagccaaggctgcccgtccgaacctgttccgcaagccggacctcgacgaa
atgggtgccgatggcactgtgcccgcgggcaagtcgctgttcgccaagcctcatatcgac
gatatggggccaggcaccgacatgaccacgcccgcaggtgcggtgtcacgctcgttgttc
aagaagcagtcggcagccgaagcccatggttcggactacggcgtccccgaagacggcaat
tcgctgttcaagaagaacagcctcgacgagatgaccgtccgccgcaccgaaaagccggtc
gaaggcgtcaagccggtcaagcgtgccaagatcggcgctggctcctacgaggatccagcc
gaggccgcgcgtgccaggaagaagccgggcaagtcaggacggccggggaaatag
DBGET
integrated database retrieval system
