Aminobacter niigataensis: AMD1_2646
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Entry
AMD1_2646 CDS
T09606
Symbol
rutR
Name
(GenBank) HTH-type transcriptional regulator RutR
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
anj
Aminobacter niigataensis
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anj03000
]
AMD1_2646 (rutR)
Transcription factors [BR:
anj03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
AMD1_2646 (rutR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
HTH_24
HTH_10
Motif
Other DBs
NCBI-ProteinID:
CAI2933920
LinkDB
All DBs
Position
AMD1:complement(2541029..2541661)
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AA seq
210 aa
AA seq
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MEGSTPRGRTRIQKEKREVILEAALEVFSTNGFRGSTIDQIAEAAGMSKPNLLYYFRRKE
DIHETLMHRLLETWLAPLKELDNIGDPMTELRSYIRRKLEMARDFPRESRLFANEILQGA
PRIMAMLEGELKTLVDEKVEVIKGWMRSGKVAQADPWHLIFAIWATTQHYADFDVQVRAV
LGPDRGGEGRFEDAARFLEQLFVEGLRPKG
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggaaggctcgacaccgcgcggccgcacccgcatccagaaggagaagcgcgaggtcatt
ctcgaagcagcgctcgaagtattctccaccaacggtttccgcggctcgaccatcgaccag
atcgccgaagcggcgggcatgtccaagcccaatttgctctattatttccgccgcaaggaa
gacatccacgagacgctgatgcaccggctgctggaaacctggctggcgccgctgaaggaa
ctcgacaacatcggcgacccgatgaccgagctcaggagctacatcaggcgcaagctcgaa
atggcgcgcgattttccgcgcgagagcaggctcttcgccaacgaaatcctgcagggcgcg
ccccgcatcatggcgatgctcgaaggcgagctgaaaacactggtcgacgaaaaggtcgag
gtcatcaagggctggatgcgatcgggcaaggtcgcccaggccgatccctggcacctgatt
ttcgccatctgggcgacgacccagcactatgccgatttcgacgtccaggtccgcgccgtc
ctcggccccgaccgtggtggcgagggacgcttcgaagatgccgcccgcttcctggaacag
ctttttgttgaaggacttaggccgaaaggctga
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integrated database retrieval system
