Aminobacter niigataensis: AMD1_2730
Help
Entry
AMD1_2730 CDS
T09606
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
anj
Aminobacter niigataensis
Pathway
anj03420
Nucleotide excision repair
anj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AMD1_2730
03430 Mismatch repair
AMD1_2730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
anj03400
]
AMD1_2730
Enzymes [BR:
anj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMD1_2730
DNA repair and recombination proteins [BR:
anj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AMD1_2730
MMR (mismatch excision repair)
Other MMR factors
AMD1_2730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
ADH_N_2
DEAD
DUF3553
ResIII
Motif
Other DBs
NCBI-ProteinID:
CAI2934004
LinkDB
All DBs
Position
AMD1:complement(2621082..2623580)
Genome browser
AA seq
832 aa
AA seq
DB search
MSDFPDDMPFFDEPGGMPPRPGSTPAPSGIAARAMAARQAPAAADYLKGLNPEQRQAVET
TEGPVLVLAGAGTGKTRVLTTRIAHILSQGRAYPSQILAVTFTNKAAREMKQRIGLLVGE
AVEGMPWLGTFHSIGVKMLRRHAELAGLRSDFTILDTDDVIRLIKQLIQAEGLDDKRWPA
RQFAMMIDGWKNKGLGPAEIPEGDARAFANGKGRELYKAYQDRLQTLNACDFGDLLCHPI
RIFRAYPDVLKEYHKRFKYILVDEYQDTNTAQYMWLRLLAQETGAPGQKNVCCVGDDDQS
IYGWRGAEVDNILRFDKDFPGAVVIRLERNYRSTAHILGAASHLIAHNEGRFGKTLFTDR
NDPEDGKVNVHAAWDSEEEARAVGETIEQLQRQKHNLNDMAILVRASFQMREFEDRFVTL
GVNYRVVGGPRFYERQEIRDAMAYFRVVAQGADDLAFERIVNIPKRGLGEAAIRQVHDTA
RALGVPMLEAARNLAESDELKPKPRAALREVAANFERWQKALDNTPHNELAETILEESGY
TDMWKNDRSAEAPGRLENLKELIRSMEEYESLRSFLEHVALVMDADKNEDLDAVNIMTLH
SAKGLEFETVFLPGWEEGLFPHQRALDEGGRSGLEEERRLAYVGLTRAKKNLHLWFVSNR
RIHGLWQSTIPSRFLDELPEAHVEVADAGNSYGGYGGGGRNPYGASRFDDVGQKSFSNTY
ATPGWQRAQQNRTEATDRNWGSRSGHSVERIGYGETDSGFGAGRGSVKGRTIEGELVAKS
VASEPSRFKVGDRVFHQKFGNGNISAIDGNKLTIDFDKAGQKKVLDGFVNAV
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactttccggacgacatgccgtttttcgacgagcccggcggaatgccgccccgg
cccggcagcacacctgcgccgagcggtattgccgcgcgcgccatggccgcccgccaggcg
cccgccgcagccgactatctcaagggcctgaaccccgagcagcgccaagctgtcgagacc
accgaaggcccggtcctggtgctcgccggcgccggcaccggcaagacgcgtgtgctcacc
acccgcatcgcccacatcctcagccagggccgcgcctaccccagccagatcctcgccgtc
accttcaccaacaaggccgcgcgcgagatgaagcagcgcatcggcctgcttgtcggcgag
gccgtcgagggcatgccctggctcggcaccttccactccatcggcgtcaagatgctgcgc
cgccatgccgaactggccggcctgcgctccgacttcaccatcctcgataccgacgacgtc
atccgcctcatcaagcagttgatccaggccgaaggcctcgacgacaagcgctggccggcg
cgccagttcgccatgatgatcgacggctggaagaacaaggggctcggcccggccgagatc
cccgagggcgatgcgcgcgccttcgccaacggcaagggccgcgaactctacaaagcctat
caggaccggctgcagacgctgaacgcctgtgatttcggcgaccttttgtgccacccgatc
cgtatcttccgcgcctatcctgacgtgttgaaggaataccacaagcgcttcaaatacatc
ctcgtcgacgagtatcaggacaccaacaccgcgcaatatatgtggctgcgcctgctcgcg
caggagaccggcgcgccgggccagaagaacgtctgctgcgtcggcgacgacgaccagtcg
atctatggctggcgcggcgccgaggtcgacaacatcctgcgcttcgacaaggattttccg
ggtgccgtcgtcatccggctcgagcgcaactaccgctccaccgctcatatcctcggtgcc
gcttcccatctcatcgcccataatgagggccgcttcggcaagacgctgttcaccgatcgc
aacgatcccgaagacggcaaggtcaatgtccacgccgcctgggactccgaggaggaagcc
cgcgccgtcggcgagacgatcgagcaactgcagcgccagaagcacaacctcaacgacatg
gcgattctcgtccgcgcctcgttccagatgcgcgagttcgaagaccgcttcgtcaccctt
ggtgtcaactaccgggtcgtcggcggcccgcgcttttacgagcgccaggaaatccgcgac
gccatggcctatttccgcgtcgtcgcccagggcgccgacgacctcgccttcgagcgtatc
gtcaacatccccaagcgcggccttggcgaagccgccatccgccaggtccacgacaccgcc
cgcgcccttggcgtgccgatgctcgaagcggcgcgcaatctggccgaaagcgacgagctc
aagcctaagccgcgtgccgccttgcgcgaggtcgcggccaatttcgagcgctggcaaaag
gcgctcgacaacacgccgcacaacgaactcgccgagaccatcctcgaagagagcggctac
accgacatgtggaagaacgaccgctcggccgaagcgccgggacggctcgaaaacctcaaa
gaactcatccgctcgatggaggaatacgaatcgctgcgctcgttcctcgagcatgtcgcg
ctcgtcatggatgccgacaagaacgaggacctcgacgccgtcaacatcatgacgctgcac
tcggccaagggcctggagttcgagaccgtgttcctgcccggctgggaggaaggcctgttc
ccgcaccagcgcgccctcgacgagggcggccgctcgggcttggaggaagaacgccgcctc
gcttatgtcggcctcacccgcgccaagaagaacctgcatctgtggttcgtctccaaccgc
cgcatccacggcctgtggcaatcgacaatcccctcgcggttcctcgacgaactgcccgag
gcgcatgtcgaggtcgccgacgccggcaattcatacggcggctacggtggcggcggccgc
aacccctacggcgcctcgcgtttcgacgacgtcggccagaaatccttctccaacacctat
gccacgccgggttggcagcgcgcgcagcagaaccgcaccgaagccaccgaccgtaactgg
ggctcgcgctccggtcattcggtcgagcgcatcggctatggcgaaaccgattcaggcttt
ggcgccggccgcggctcggtcaagggccgtaccatcgagggcgagttggtggccaagtcc
gtcgcgtcagaaccgtcgcgcttcaaggtaggggaccgcgtgttccaccaaaaattcggc
aacggcaacatctcggccatcgacggcaacaagctgaccatcgacttcgacaaggccgga
cagaagaaggtgctggacgggtttgtgaacgcggtatga
DBGET
integrated database retrieval system
