Aminobacter niigataensis: AMD1_3310
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Entry
AMD1_3310 CDS
T09606
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
anj
Aminobacter niigataensis
Pathway
anj00541
Biosynthesis of various nucleotide sugars
anj01100
Metabolic pathways
anj01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
AMD1_3310 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
anj01005
]
AMD1_3310 (kdsA)
Enzymes [BR:
anj01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
AMD1_3310 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
anj01005
]
Lipid A
AMD1_3310 (kdsA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
CAI2934584
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All DBs
Position
AMD1:3166703..3167536
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AA seq
277 aa
AA seq
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MTKPNANVTVGKTLFANDAPLSLIAGPCQFESRQHAFDMAGKLKELTQKLGIGFVYKSSF
DKANRSSLSSTRGAGLDAALPVFADLRKELGVSVLTDVHTEEQCAIVGEVVDVLQIPAFL
SRQTDLLIAAARTGKVVNVKKGQFLAPWDMKNVVAKVTGSGNANVLVTERGASFGYNTLV
SDMRALPIMAEIGAPVIFDATHSVQQPGGQGATSGGERRFVETLARAAVAVGVAGVFIET
HEDPDNSTSSDGPNMVPFKDMPALLERLMAFDRVAKG
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagccgaatgcaaatgtgacggtcggcaagaccctgttcgccaacgatgcgccg
ctgtcgctgattgccggcccgtgccagttcgaatcgcgccagcacgccttcgacatggcc
ggcaagctcaaggaactgacgcagaagctcggcatcggctttgtctacaagtcgagcttc
gacaaggccaaccgcagctcgctgtcgagtacccgcggtgccgggctcgatgcggcactg
ccggtcttcgccgatctgcgcaaggaactcggcgtttccgttctcacggatgtgcacacc
gaagagcagtgcgccatcgtcggcgaggtggtcgatgtgctgcaaatcccggccttcctc
agccgccagaccgatcttctgattgctgccgccaggaccggcaaggtggtcaacgtcaag
aagggccagttcctggcgccctgggacatgaagaacgtcgtcgccaaggtgaccggttcg
ggcaacgccaacgtgctcgtcaccgagcgcggcgcctccttcggctacaacacgctcgtc
tccgacatgcgtgcgttgccgatcatggccgagatcggcgcccccgtgatcttcgatgcc
acccattcggtgcagcagccgggcgggcagggcgcaacctccggcggcgagcgccgtttc
gtcgagaccctggcgcgtgcggccgtcgccgtcggtgttgccggcgtgttcatcgaaacg
catgaagaccccgacaattcgacctcgtcggacggccccaacatggtaccgttcaaggac
atgccggctctgctcgaaaggctgatggctttcgaccgggtcgccaagggctga
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