Aminobacter niigataensis: AMD1_3421
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Entry
AMD1_3421 CDS
T09606
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
anj
Aminobacter niigataensis
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
anj03009
]
AMD1_3421 (rimO)
Enzymes [BR:
anj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AMD1_3421 (rimO)
Ribosome biogenesis [BR:
anj03009
]
Prokaryotic type
ribosomal protein modification factors
AMD1_3421 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
CAI2934695
LinkDB
All DBs
Position
AMD1:complement(3272004..3273320)
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AA seq
438 aa
AA seq
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MTAAPRVSFVSLGCPKALVDSERILTQLRAEGYEIARKHDGADLVVVNTCGFLDSARTES
LDAIGTAMKENGKVIVTGCMGATPELIREKHPNVFAITGPQAYESVMTAVHEAAPPAHDP
FTDLLPPQGVKLTPRHYAYLKISEGCNNRCTFCIIPDLRGDLVSRPAGDVLREAEKLANA
GVKELLVISQDTSAYGIDIKYATSPWKDREVRAKFLDLSEELGELGIWVRMHYVYPYPHV
ADVIPLMAEGKILPYLDIPFQHASPQVLKNMRRPAHGEKALERIRGWRDVCPDLAIRSTF
IVGFPGETEEDFEMLLDWIDEAKIDRAGCFKYEPVSGARSNDLGLEQVPEEVKEARWHRF
MQRQQKISAAQQARKVGKRLPVIIDEANGTSAKGRTKYDAPEIDGSVHIQSRRPLRVGDI
VTVKIDRADAYDLYGSAV
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagcaccccgtgtcagctttgtcagcctcggttgcccgaaggcgcttgtcgat
tccgaacgcatcctcacgcagctccgcgccgaaggctacgaaatcgcccgcaagcatgac
ggcgccgacctcgtggtggtcaacacctgcggcttcctcgattccgcgcgcaccgagtct
ctggacgccatcggcacggcgatgaaggagaacggcaaggtcatcgtcaccggctgtatg
ggcgcgacgccggaactgatccgcgaaaagcaccccaacgtgttcgccatcaccggcccg
caggcctatgagagcgtcatgacggccgtccacgaggcagcgccgcccgcgcacgacccg
ttcaccgacctgctgccgccgcagggcgtcaagctcaccccacgccactacgcctatctg
aagatttcagagggttgcaacaaccgctgcaccttctgcatcattccagacctgcgcggc
gacctggtctcgcgcccggccggcgacgtgctccgcgaggcggaaaagctcgccaacgcg
ggcgtcaaggaactgctggtcatctcccaggacaccagcgcctacggcatcgacatcaaa
tatgcgaccagcccttggaaggaccgtgaggttcgcgcgaaattcctcgacctgtcggag
gaactcggcgagctcggcatctgggtgcgcatgcattacgtctatccctacccgcatgtc
gccgacgtcattccgctgatggccgagggcaagatcctgccctacctcgacattcccttc
cagcacgcctcgccgcaggtactgaagaacatgcgccgccccgcccatggcgagaaggcg
ctggagcgcatccgcggctggcgcgatgtctgccccgatcttgccatccgctcgaccttc
atcgtcggtttccccggcgagaccgaggaagacttcgaaatgctgctcgactggatcgac
gaggccaagatcgatcgcgccggctgcttcaaatacgagccggtcagcggcgcgcgttcc
aacgacctcggcctcgaacaggtgccggaagaggtcaaggaagcccgctggcatcgcttc
atgcagcgccagcagaagatttcagccgcccagcaggcaaggaaagtcggcaagcgcctg
cccgtcatcatcgacgaggcgaacggtacttcggccaagggccgcaccaaatacgacgcg
cccgagatcgacggctcggtgcatatccagtcgcgccgcccgctgcgcgttggcgacatc
gtcaccgtcaagatcgaccgtgccgacgcctatgacctctacggctcggccgtctga
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