KEGG   Aminobacter niigataensis: AMD1_3428
Entry
AMD1_3428         CDS       T09606                                 
Name
(GenBank) IcmF-related protein
  KO
K11891  type VI secretion system protein ImpL
Organism
anj  Aminobacter niigataensis
Pathway
anj03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:anj00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AMD1_3428
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:anj02044]
    AMD1_3428
Secretion system [BR:anj02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AMD1_3428
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical MMR_HSR1
Other DBs
NCBI-ProteinID: CAI2934702
LinkDB
Position
AMD1:complement(3279691..3283209)
AA seq 1172 aa
MTAWLWRIIGLLALAGLCAAVWFGGPLIVLDGSRPFSADWLRLVVIGVVVIAIAGVYLLR
ALHARRAQRALEAAAVGGVAFGGDAGLLETGMLKAIATLKRASGRRNFLYEVPWYVIIGP
PGVGKTTALVNSGLKFPLAVSGTAQPVPGVGGTRNCDWWFTDDAVLIDTAGRYTTQDSDA
EGDRKDWLAFLSLLKKHRGRQPVNGVIVAISLADLLAPGDQEAGAHAIEIGNRLQEISEV
LKVRYPIYVLFTKADLVAGFMEYFGAFDEDRRRIVWGATFQAQDYRKPMVGEAPAEFDTL
VQRLSEELPDRLQEQSDPLARISTAGFVAQFGSLRQRITDFLERVFDPAARQSNAVLRGF
YFSSGTQEGTPIDRVLGAIGRSFGTASTSQMSGTGKSFFLHDLLAKVIFAEAGWVSHDDA
ADRRARLSRYAGLGAIALLATAGLAAMAVSYTANKTLIAATDQAAENYRSSASALLTADA
VADTDLENVIDALEEVRNLPAGYESRDEPMPAPEMLGMSQRPRLHSATAAAYRLALERML
RPRLLLRLEQVLEARMSDPTALYEALKIYLMLGGKAPGTDDDQIVAWMKADWERNRYPGP
QNREGRLILEKHLRAMLALDDEFNPSIELNRSVVEAAQRALGRMTVADRASALISSAISA
AALTDFSVAARGGPEAKLIFEAIDGSDLSSLRIPGLYSYAGFNDFYLNQLAGIAQKLADD
QWVLGAGAEQGDVEQELLRLGPELLERYSNDFARTWNEALDRLKFKPMSGDKTEYLALSA
AGSPSSPLSQLFEAIARETALTRATGAVAADVDERADGLARIGIELAGRKSSSRAGAAFA
NTPTLVPGANIEAQFRPFQLLVDGRPGQRPIDALIQNFHAIYQNLTVSAAAPARGDRVNA
NLQLQISNLRANASRLPKTLARMVHAAADDFEGDVAETSLAQLGQMLEQTVSGPCEEAIA
NRYPFGGGGAQDVPIADFSRLFAPSGVLDRFFAQNLASFADMSGQEWQWKQESRLGRGLS
KSTLKQFQLAAEIRDAFFPLGGSTPAVNITFTPFSLHGDADMALLDVNGQVVQSYQNGSS
PGTVTWPGSQTAGSANLSLTPELPGRDSALRFEGPWALKRLLDAGTSTLNGDKLELRFVI
GGRDVAYTVQVNPPGNPFALPAFSDFTCPKGL
NT seq 3519 nt   +upstreamnt  +downstreamnt
atgacggcctggctgtggcggatcatcggcctgctggcgctggcgggcctctgcgcggcc
gtgtggtttggcggaccgctgattgtcctcgacggcagccgaccgttttctgccgactgg
ctgcgcctggtcgtcatcggcgtcgtcgtgatcgcgattgccggcgtctacctgctgcgc
gcgctgcatgcgcgcagggcccaacgggcgctcgaagcggcggctgtgggcggtgtcgct
ttcggcggcgatgccgggctgctggagaccgggatgctcaaggccatcgccacgctcaag
cgtgccagcggcaggcgcaatttcctctacgaagtgccatggtatgtcatcatcggcccg
ccgggtgtgggcaagaccaccgcactggtcaactccggcctcaagttcccgctggccgtc
tcgggaacggcgcagccggtccccggcgtcggcggcacccgaaactgcgactggtggttc
accgacgatgcggtcctgatcgacaccgccgggcgttacacgacgcaggactcggatgcc
gaaggcgaccggaaggactggctggcatttctgtccctgctcaagaagcaccgtggccgg
cagccggtcaacggcgtgatcgtggccatcagcctcgccgatctgctggcgcctggcgat
caggaggccggcgcgcacgccatcgagatcggcaaccgcctgcaggaaatcagcgaggtc
ttgaaggtcaggtatccgatctacgtcctgttcaccaaggccgatcttgtcgctggcttc
atggaatatttcggcgctttcgacgaagaccggcggcgcatcgtctggggcgccacgttc
caggctcaggattatcgcaaaccgatggtcggcgaagcgccggccgaattcgacacgctc
gtgcagcgcctgtcggaagagctcccggaccggctccaggagcagtcggatccgctcgct
cgcatttcaacggccggctttgtcgcgcagttcggctcgctgcggcaacgcatcacggat
tttctcgaacgtgtattcgatccggcggcgcggcagtcgaatgccgtcctgcgcggcttc
tatttttcctccggcacccaggagggcacgcctatcgatcgtgtgctcggcgccattggc
cgcagcttcggcaccgcctcgaccagccaaatgtcgggcacgggcaaaagcttcttcctg
cacgatctgcttgccaaggtcattttcgccgaagccggatgggtctcccacgacgatgcc
gccgaccggcgcgccaggctctcgcgttatgccggactcggcgccattgccttgctggca
accgctgggctcgcggccatggcggtcagctacaccgccaacaagaccctgatcgcagcc
accgaccaggctgccgaaaactatcgttcatcggccagcgcgctgctgacggccgacgcg
gtggccgacacagacctcgaaaacgtcatcgatgccctggaggaagtccgcaacctgcct
gccggctacgaaagccgcgacgagccgatgccggcaccggaaatgttgggcatgagccag
cgcccgcgtctccattcggcaactgccgctgcctatcggttggcgttggaaaggatgctt
cggccacggcttctgctgcgcctggaacaagtgctggaagcgcggatgagcgatccgacg
gcgctctacgaagcgctcaagatctacctcatgctcggcggcaaggcacccgggaccgac
gacgaccagatcgttgcgtggatgaaagccgactgggagcgcaaccgctatccggggccg
caaaatcgcgagggccgcctcatcctcgaaaagcacttgcgcgccatgctggcgctcgac
gacgagttcaacccatcgatcgagctcaaccgctccgttgtcgaggcagcccaacgcgcg
ctaggccgcatgacggttgccgaccgcgcttcagccctgatttcgtcggccatttcggct
gccgcgctcaccgatttttccgtagccgcgagaggcggaccggaagcgaagctcattttc
gaggcaatcgacggcagcgatctgtccagccttcgtatcccgggcctctacagctacgcc
ggtttcaacgatttctacctcaaccaactggccggcatcgcgcaaaaactggccgatgac
cagtgggtgcttggtgcaggcgcggaacaaggcgatgtcgagcaggaactgctcaggctc
ggtcccgaattgctcgaacgctacagcaacgacttcgcgcgaacatggaacgaggcgctc
gacagactgaagttcaagcccatgtcgggggacaagacagaatatctggccctttccgct
gccgggtcgcccagttcgccgctttcacagctgttcgaggcgatcgccagggaaaccgca
ctgacccgcgccaccggcgccgtcgcggcggacgtcgacgaacgcgctgacgggctcgcg
cgcatcggcatcgaactcgctggccgcaaatcgagcagccgggccggagccgcctttgcc
aacacgccgacgctggtgccgggcgccaatatcgaggcccagttccgtccgttccagctt
ctggtcgacggtcgtcccggtcaacggcccatcgatgcgctgatccagaatttccacgcc
atctatcagaacctcacggtatcggccgccgcccctgcccgtggcgaccgcgtcaatgcc
aacctccagctgcagatttccaacctccgcgcaaacgcctcccgcctgccgaagacgctg
gcgcgcatggtgcatgccgcagccgacgatttcgaaggcgacgttgccgaaacctcgctg
gcacaactcggccagatgctcgagcagaccgtcagcggtccgtgcgaggaagcgatcgcg
aaccgctatccgttcggcggtggcggtgcgcaggatgtgcccatcgccgatttttcccgc
cttttcgcgcccagcggcgtcctcgaccgcttcttcgcccagaatctggcctcgttcgcc
gacatgtcggggcaggaatggcaatggaagcaggagtcccgcctcggccgtggcctgtcg
aaatcgacattgaagcagttccagctggccgcagagatccgcgacgcgttcttcccgctt
ggcggatcgacgccggcggtgaatatcaccttcaccccattttcactgcatggcgacgcc
gacatggcgttgctcgacgtcaatggccaggtcgtgcagagctatcagaacggcagcagc
cccggcaccgtcacctggcccggcagccagaccgccggctccgccaatctcagcctgacg
ccggaactgcccgggcgcgactccgccctcaggttcgaggggccatgggccctcaagcgt
ctgctcgatgccggcacctccaccctcaacggcgacaagcttgagctgcgtttcgtcatc
ggcggccgcgacgtcgcctacacggtccaggtcaatccgccgggcaatccatttgcgctc
cctgctttctccgacttcacctgtccgaaaggcctttga

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