Aminobacter niigataensis: AMD1_3563
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Entry
AMD1_3563 CDS
T09606
Symbol
iclR
Name
(GenBank) Acetate operon repressor
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
anj
Aminobacter niigataensis
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anj03000
]
AMD1_3563 (iclR)
Transcription factors [BR:
anj03000
]
Prokaryotic type
Helix-turn-helix
IclR family
AMD1_3563 (iclR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR
MarR_2
TrmB
HemN_C
DprA_WH
HTH_20
HTH_24
HTH_23
SMC_ScpB
Dimerisation
RdRP_3
Rrf2
Motif
Other DBs
NCBI-ProteinID:
CAI2934837
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All DBs
Position
AMD1:3422749..3423585
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AA seq
278 aa
AA seq
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MATMEKRQRGRPRAFQPAPDSGSVQSLDRALRILAIVAHSDGLSLSEISAASELAAATAY
RMLTTLQNHGMVEFDSDGQLWSIGVETYRMGAAFLRRRKLVDRARTVMQELMEKTGETAN
LGVAEDDCVVFVSQVETHQAIRAFFRPGTRSPFHASGIGKAVLAHLDRDRVNAIVRKAGL
DAYTERTLSEPASLARDLEQIRARGWSVDDEERYPGMRCIAAAVFNEFGEPIGGVSVSGP
TVRVTPERLGEIGPIVRDAAAELTRMIGGSPDGTVPGL
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgatggaaaaacggcaacgtgggcggcctcgcgccttccagcccgccccagac
tcgggatccgtgcagtcgctggatcgggcactgcgcatcctggcgatcgtcgcccatagc
gacgggctgtcactgagcgagatatcggccgcctccgagcttgccgcggcgaccgcctac
cgcatgctgacgacgctgcagaaccacggcatggtcgagttcgacagcgacggccagctg
tggtcgatcggggtcgagacctatcgcatgggagctgccttcctgcgccggcgcaagctc
gtcgaccgtgcccgcaccgtcatgcaggaactgatggagaaaaccggcgaaacggccaac
ctcggtgtcgccgaagacgattgtgtcgtcttcgtcagccaggtcgagacgcaccaggcg
atccgtgccttcttccggccaggcacccgcagcccgttccatgcatcgggcatcggcaag
gcggttcttgcccatctcgaccgcgaccgcgtcaacgccatcgtgcgcaaggccggcctc
gacgcctataccgaaaggacgctctcggaaccggcatcgcttgcgcgcgatctcgaacaa
atccgcgcgcgcggctggtcggttgacgatgaggagcgttaccccggtatgcgctgcatc
gcagcggctgtgttcaacgagttcggcgaacccattggcggcgtttcggtttcggggccg
actgtgcgcgtgacaccggaacggctcggcgagatcggcccgatcgtccgtgacgcggcg
gcagagctgacccggatgatcgggggatcgcccgacggcaccgtgccgggcctctga
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