Aminobacter niigataensis: AMD1_3901
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Entry
AMD1_3901 CDS
T09606
Symbol
cph2
Name
(GenBank) Bacteriophytochrome cph2
Organism
anj
Aminobacter niigataensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_7
PAS_4
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
CAI2935175
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Position
AMD1:3739058..3741475
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AA seq
805 aa
AA seq
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MGSLFAPGSRRAFAFHLLKTLLIGTIAAFAVAAAYLSFVIYERQASIGKISRYDVAWSAS
QGMNEYLRLSQRVTALAASGSEPLKAEVQLRFDILKGRLSLFTSGQFQTFVSEAAEREET
VRRLSELIAELDGVMSRIGEPEVARSAVLSMAPLETDLIGLASEANQYSAIQMAKVDNEL
LRLHSNFSAVAVGFFLCSLAFIGLLGWHNRLLTHTYDALNTVNADLRRTSKDLEGANAAV
LEANHALATQNGLFDAALSNMSHGLCMFDADERLIVSNGKFATMYGVPPESLPPGTTPEQ
VKLSSIKAGTSTQQSAELAYWKQQQLIDHRKPGILLQKLTDGRIISVSHQPMERGGWVAT
YEDITERHQAEERIAHMARHDPLTGLPNRLLLRERLEQILMQGHGHQKDTAVLCLDLDNF
KNVNDTLGHPIGDALLREVASRISSLVRDDDVVARLGGDEFLIVQPAVGRDEAGRVARRL
IEALEQPYQLDGHLVVVGASIGIALESETKTGPDDLVKNADLALYRAKSDGRGTYQFYKP
EMDDRLQRRRMLELDLRAADFDKEFQLAFQPIINLQSKAVTTVEALLRWPGCQRGHVSPD
EFIPIAESTGLIVQLGAWVLEGACREAMSLPGNVNVAVNLSPSQFRRGNIVETVSAVLAM
TGLPAERLELEITESLLLDDSKETLHALNRLHSLGVLISLDDFGTGYSSLSYLRNFPVDK
VKIDRSFIAEIAGNRDHMAIVSAIVNLAHALEITTIAEGVETEEQLLIVRATGCDAVQGH
FFSAPKPAAQLRKYLEKPHDRLTLA
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgggttccttgtttgcgcctggttcccgccgcgcgttcgcattccacctgctcaagaca
ctcctgatcggaaccatcgccgctttcgccgttgctgcagcgtatctgtcgttcgtgatc
tatgagcgccaggcatcgatcggcaagatctccagatatgacgtggcgtggagcgccagc
cagggcatgaacgaatatctgcggctgtcgcagcgcgtcaccgcgcttgcggcctccggg
agcgaacctctcaaagccgaggtgcaacttcgattcgacatcctgaagggccggctcagc
ctgttcacaagcggtcagttccagaccttcgtgagcgaagcggcagagcgggaggagacg
gtccgccggctgtccgagctcatcgcggaactggacggggtgatgagccgcatcggcgaa
cctgaagtcgcccgatcggcggtgctatcgatggcaccgctggaaacggacctcatcggc
ctcgcctcggaagccaatcagtacagcgccatccagatggccaaggtcgacaacgagttg
ctgcggctgcacagcaatttctccgccgttgcggttggtttcttcctttgcagcctggcc
tttatcggcttgctcggatggcacaatcgcctgctgacgcatacctacgatgcgctgaac
accgtgaacgcagacctgcggcgcacctcaaaggatctggagggtgcgaacgctgccgtg
cttgaagccaatcatgccctggcaacccagaacggcctgttcgacgcggccttgagcaac
atgtcgcatgggctttgcatgttcgatgccgacgaacggctgatcgtgagcaatggcaag
ttcgccaccatgtacggggtcccgccggaaagcctgccgcccgggacaacgccggaacag
gtcaagttgagctcgatcaaggcagggacttcgacgcagcagagcgccgagctcgcctat
tggaaacagcaacagctgatcgaccaccgcaagcccggcatcctgctacagaagctgacc
gatggccgcatcatctccgtgagccaccagccgatggagcgagggggctgggtcgcgacc
tacgaggacatcaccgaacgtcaccaggcggaagaacgcatcgcccatatggcgcggcat
gacccgctgaccgggcttcccaaccgcctgctgctgcgcgagcgcctggaacaaattctc
atgcaaggtcatggccaccagaaggacactgcggtcctttgcctcgacctggacaatttc
aagaacgtcaacgatacgctcggccaccctatcggcgacgcattgctgcgcgaggtcgcg
tcccgcatttcaagcctcgtgcgcgatgacgacgtggtggcccgacttggcggtgatgaa
ttcctcatcgtccagccggcagtcggacgcgacgaggcgggacgcgtggcgcggcgcctc
atcgaagccctcgaacagccgtatcagcttgatgggcatctggtggtcgtcggcgccagc
atcggcattgcgcttgaatcggaaaccaagaccggccctgacgacctggtgaagaatgcg
gatcttgcgctctatcgggccaaaagcgacgggcgtgggacctatcaattctacaagccg
gagatggatgaccggctgcagcgtcgccgcatgcttgaactcgacctgagagctgccgat
ttcgacaaggagttccaactcgccttccagccgatcatcaatcttcaaagcaaggcagtc
acgacggtggaagccctgctgcgatggcccggctgccagcgtggccacgtttcaccagac
gaattcatccccatcgccgaaagcacgggcctgatcgtgcagctaggcgcctgggtcctg
gaaggtgcctgccgagaagcaatgagcctgccgggcaatgtcaatgttgccgtgaatctg
tcgccgagccagttccgaagaggcaatatcgtcgaaaccgtttccgccgtgctggcgatg
acaggccttccagccgagcgcctcgaactcgagatcacggaatccctcctgctcgacgac
agcaaggaaaccttgcatgccctgaaccggctccattcgctgggtgtcctgatctcgctc
gacgatttcggaactggctactcgtcgctcagctatctcaggaactttccggtcgacaag
gtcaagatcgaccgctcgttcatcgcggagatcgccggcaacagggatcacatggccatc
gtcagtgcgatcgtgaaccttgcccatgcactggaaataaccacgatcgccgagggcgtc
gaaaccgaagaacagctcctgatcgttcgggccaccggatgcgatgcggttcaaggacac
ttcttcagtgcaccgaaaccggctgcccaactccggaaatatctcgaaaagccgcacgac
aggctgaccctggcctag
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