Aminobacter niigataensis: AMD1_3985
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Entry
AMD1_3985 CDS
T09606
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
anj
Aminobacter niigataensis
Pathway
anj00260
Glycine, serine and threonine metabolism
anj00460
Cyanoamino acid metabolism
anj00630
Glyoxylate and dicarboxylate metabolism
anj00670
One carbon pool by folate
anj00680
Methane metabolism
anj01100
Metabolic pathways
anj01110
Biosynthesis of secondary metabolites
anj01120
Microbial metabolism in diverse environments
anj01200
Carbon metabolism
anj01230
Biosynthesis of amino acids
anj01240
Biosynthesis of cofactors
anj04981
Folate transport and metabolism
Module
anj_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AMD1_3985 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AMD1_3985 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AMD1_3985 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AMD1_3985 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AMD1_3985 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AMD1_3985 (glyA)
Enzymes [BR:
anj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AMD1_3985 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
DUF5403
Motif
Other DBs
NCBI-ProteinID:
CAI2935259
LinkDB
All DBs
Position
AMD1:complement(3815263..3816564)
Genome browser
AA seq
433 aa
AA seq
DB search
MAASKNLESFFGTPLSEADPEIFGSIRNELGRQRHEIELIASENIVSRAVLEAQGSIMTN
KYAEGYPGKRYYGGCQFVDVAEELAIERAKKLFDCKFANVQPNSGSQMNQAVFLALLQPG
DTFMGLDLNSGGHLTHGSPVNMSGKWFKVVSYGVRKDDNLLDMDEVARLARETKPKLILA
GGTAYSRIWDWKRFREIADEVGAYLMVDMAHIAGLVAGGVHPSPLPHAHVVTTTTHKSLR
GPRGGMILTNDEDIAKKMNSAVFPGLQGGPLMHVIAAKAVAFGEALKPEFKTYAANVAAN
AKALAASLKDTGLDIVSGGTDNHLMLVDLRPKNATGKRAEAALGRANITCNKNGIPFDPE
KPFVTSGVRLGTPAGTTRGFGEAEFREIGQLIAEVLDGLKAANSDEGNAAVEAAVKRKVV
DMTERFPLYPYLG
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctcgaaaaacctcgaatccttctttggaaccccgctgtcggaggccgatccc
gaaatcttcggctcgatccgcaacgaactcgggcgccagcgccatgagatcgagctgatc
gcctcggaaaacatcgtttcccgcgccgtccttgaggcgcagggctcgatcatgaccaac
aaatacgccgagggttatcccggcaagcgttactatggtggctgccagttcgtcgacgtc
gcggaagagctggcgatcgagcgcgccaagaagctgttcgactgcaagttcgccaacgtc
cagccgaattccggcagccagatgaaccaggcggtgttcctggccctgctgcagccgggc
gacaccttcatgggcctcgacctgaattcgggtggtcacctgacccatggttcgccggtc
aacatgtccggcaagtggttcaaggtcgtgtcctacggcgttcgcaaggacgacaatctg
ctcgacatggacgaggtcgcgcgcctcgcccgcgagaccaagccgaagctgatcctcgcc
ggcggcaccgcctattcgcgtatctgggactggaagcgtttccgcgagatcgccgacgaa
gtcggcgcctacctaatggtcgacatggcccacatcgctggcctggttgccggcggcgtg
cacccgtcgccgctgccgcatgcccatgtcgtcaccaccaccacgcacaagtcgctgcgc
ggtccgcgcggcggcatgatcctcaccaatgacgaggatatcgccaagaagatgaactcg
gccgtgttccccggcctccagggcggcccgctgatgcacgtcatcgctgccaaggcggtt
gccttcggcgaggcgctgaagccggagttcaagacctacgcggcaaatgtcgctgccaac
gccaaggcgctcgccgccagcctcaaggacaccggcctcgacatcgtttcgggcggcacc
gacaaccatctgatgctggtcgatctgcgtcccaagaatgccaccggcaagcgcgccgag
gcagcgctgggccgcgccaacatcacctgcaacaagaacggcattcccttcgatccggaa
aagcccttcgtcacctcgggcgtccgtctcggcaccccggccggcacgacccgcggattc
ggcgaggccgagttccgcgagatcggccagttgatcgccgaagtcctggacggcctcaag
gcggcgaattccgacgagggcaacgctgccgtcgaggcggcggtcaagcgcaaggtggtc
gacatgaccgagcgcttcccgctttatccttatctcggctaa
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