Aminobacter niigataensis: AMD1_4054
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Entry
AMD1_4054 CDS
T09606
Symbol
lcfB
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
Organism
anj
Aminobacter niigataensis
Pathway
anj00061
Fatty acid biosynthesis
anj00071
Fatty acid degradation
anj01212
Fatty acid metabolism
anj02024
Quorum sensing
anj04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AMD1_4054 (lcfB)
00071 Fatty acid degradation
AMD1_4054 (lcfB)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AMD1_4054 (lcfB)
09145 Cellular community - prokaryotes
02024 Quorum sensing
AMD1_4054 (lcfB)
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Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
CAI2935328
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All DBs
Position
AMD1:complement(3893699..3895240)
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AA seq
513 aa
AA seq
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MRLEQFLRDSARLRGDKIALIARDARLSYAELDSLSDRLAAALGDRGIGRGDRVLVFMDN
CWEAAVLVFAIAKAGAVFSPINPSTKADKLDFIIGNCRARAVLTQARLLPVVSEALAARD
NDLLVVSTAAGGVAPKGAVSFEQCLASDAPPANHGGIDVDLAMLIYTSGSTGRPKGVMMT
HRNIEAAAGSITTYLENTPDDIILNVLPLAFDYGLYQLIMSVKMGATLVLEKSFSFPQAI
FDVIRAENVTGFPLVPTMAALILQMRDIKPGFLPSLRYVTNTAAALPPAHIARLRELFTG
VRLYSMYGLTECKRCTYLPPAELDRRPGSVGIAIPNTEAFVLDDDGNPAPPGTPGELVIR
GPHVMQGYWENEEATNRMLRPGKNPWEKLLYTGDLFSRDAEGFLYFVGRKDDIIKTRGEK
VAPKEVEAVLHACPGIAEAVVIGVPDPILGHAIGALVVLSDPGVTQREILRHCQAHLEDF
MVPKIIEFRSELPRTDTGKVSRRLAAESMEPTG
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgcgactggagcaattcttgcgcgacagcgcgcgcttgcggggcgacaagattgctctg
attgcgcgcgacgcgcgcctgtcctatgccgaactcgacagcctgtctgatcggcttgcc
gcagcgcttggcgatcgcggcatcggacgcggcgaccgcgtgctggtcttcatggacaat
tgctgggaagccgcggtgttggtcttcgccattgccaaggcgggagcggtcttcagcccg
atcaacccgtcgaccaaggctgacaagctcgacttcatcatcggcaactgccgcgcgcgt
gccgtgctgacccaggccaggcttttgcccgtcgtcagcgaggcgctggccgcacgcgac
aacgacttgctggtggtctcgaccgcagccgggggtgttgcaccgaagggggctgtctcg
ttcgagcaatgcctcgcaagtgacgctccgccggccaaccatggcggcatagatgtcgac
cttgccatgctgatctacacctcgggttcgacgggccggcccaagggcgtgatgatgacc
caccgcaacatcgaggctgcggccggctcgatcaccacctatcttgaaaacacgcccgac
gacatcatcctcaacgtcctgccgttggccttcgactatggcctctaccaactgatcatg
tcggtcaagatgggcgcgacgctggtgctggagaagtcgttctcgttcccgcaggcgatc
ttcgatgtcattcgcgcggaaaacgttaccggtttcccgctcgttccgacgatggccgcg
ctgatcctgcagatgcgcgacatcaagccggggttcctgccgagcctgcgctatgtcacc
aacacggcggcggcgctgccgcccgcgcatatagccaggctgcgtgagctcttcaccggg
gtcaggctctactcgatgtacggcctgaccgagtgcaagcgctgcacctacctgccgccg
gcggaactcgaccggcgccccggttcggtcggcatcgccatccccaacacggaagccttc
gtgctcgacgacgacggcaatccggcaccgcccggcacgccgggtgaactggtgatccgc
gggccacatgtcatgcagggctattgggagaacgaagaagcgacaaaccgcatgctgcgc
ccggggaaaaatccgtgggaaaagctgctctacaccggcgacctgttcagccgtgatgct
gagggtttcctctattttgtcgggcgcaaggacgacatcatcaagacgcgcggcgaaaag
gtcgcgcccaaggaggtcgaggccgtgctgcacgcctgtcccggcattgccgaggccgtg
gtgatcggcgtgccggaccccattctcggccatgccatcggagcgctcgtcgtgctgtcc
gatcccggcgtgacccagcgtgaaatcctgcgccactgccaggcgcatctcgaggatttc
atggtaccgaaaatcatcgagtttcgatccgagttgccgaggaccgacactggcaaggtg
agccggcgtctggccgccgaatccatggaaccgacgggatga
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