Aminobacter niigataensis: AMD1_4212
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Entry
AMD1_4212 CDS
T09606
Symbol
rna
Name
(GenBank) Ribonuclease I
KO
K01166
ribonuclease T2 [EC:
4.6.1.19
]
Organism
anj
Aminobacter niigataensis
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
anj03016
]
AMD1_4212 (rna)
Enzymes [BR:
anj01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.19 ribonuclease T2
AMD1_4212 (rna)
Transfer RNA biogenesis [BR:
anj03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
AMD1_4212 (rna)
Prokaryotic type
AMD1_4212 (rna)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_T2
Motif
Other DBs
NCBI-ProteinID:
CAI2935486
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All DBs
Position
AMD1:complement(4062846..4063511)
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AA seq
221 aa
AA seq
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MLLALSACAPSDEASKETQPAVTAEAPVPRGQGFDFYVLSLSWSPSYCEAEGEQANGQQC
RAGRPYAFVVHGLWPQYERGYPENCQAGASNVSNEALRGLYDLMPSAGLIRHQWRKHGTC
SGLSQADYFEVLRAARQKVEIPREFKRLDVYRTLAPGQAEGAFLQSNPGLQADAVAVACD
RRYLREVRICMTKDLEFRSCAEVDRRACRLDKVVMPPVRGR
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
gtgttgctcgcgctgtcggcctgtgcgccgtccgacgaggcatccaaggaaacccaaccg
gcggtgacggctgaagctcccgtaccgcgtggccagggttttgacttctacgtgctgtcg
ctgtcgtggtcgccgagctattgcgaggccgagggcgaacaggccaacggtcagcaatgc
cgcgccggccggccttatgccttcgtcgtccacggcctttggccgcaatatgaacgcggc
tatcccgagaattgccaggcgggagcaagtaatgtctcaaacgaggcgctccgcggcctt
tacgatctgatgccgtcggccgggctcatccgccatcagtggcgcaagcacggcacatgt
tctggcctcagccaggccgactacttcgaggtcctgcgcgccgcgcggcaaaaggtcgaa
attccccgggaattcaagcgcctggacgtttatcgcacactggcgccgggccaggcggag
ggcgcgttccttcagtcgaacccaggactgcaagcagacgccgtggcggtggcctgcgac
cgccgctacctgcgcgaggtgcggatttgcatgaccaaggatctcgaatttcgatcctgc
gccgaggtcgaccggcgtgcctgccgcctcgacaaggtggtgatgccgcctgtgcgcggc
cgctga
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