Aminobacter niigataensis: AMD1_4240
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Entry
AMD1_4240 CDS
T09606
Symbol
icsA
Name
(GenBank) Outer membrane protein IcsA autotransporter
Organism
anj
Aminobacter niigataensis
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Gene cluster
GFIT
Motif
Pfam:
Autotransporter
AC_1
Pertactin
Motif
Other DBs
NCBI-ProteinID:
CAI2935514
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All DBs
Position
AMD1:complement(4089205..4091874)
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AA seq
889 aa
AA seq
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MRIFRPAPARFGWLASTAMVLLGSTQAGFAACALTPTAGNSIYVCDSGASGGLTDTDGTN
ALTMPGGGTGTINGNVVFGGFVDRVEVHSGAITGNVQQGGGSDDFLMSGGQIQSLSQGDG
LDTFFMSGGRIVDFFEDGDTAYMTGGRIGRVNMKLDDNLFDMSGGTIDKNLVTGFGDDTI
ILSGGTIGGNISVSGGTDSVAVTGGSVGGSVLLSVGTDTFTWDGGGIIYGTVDLGGDNDT
AKLSNLSNANIGATVAVNGGDGTDGLTFDNVSAAGIARFQNWERIDATNDTELTFDGNLV
LGDAGTGTGTLTVDATSTLFGGGQNAHVLAVSGLANVINAGRIDLTNGGGGTGDTFTING
NYQGNGGLLFLDTVLGSDGSASDKLVISGGTATGSTGIEIVNAGGAGGLTVADGILVVEA
IGGATTGGAFALASRVAAGAYEYMLFKGDAAGAGQNWYLRSTMSSTSPEPAPGPSPIEPN
PQPAPVDPETAPPPPTSAIPPVLIPGEGDPVTPPTDPTPPVLPGDTPPEAPPVPPVTGEP
TPPPPTETPQLVLNPAESAPLPNPERLEGGAMPLFRGEVPTYAVISPLAHYLAMSTLGTF
HERRGEQPEVQGAGQMPAAWGRVFGQSVDMSWTGTLTPSFDGTLFGMQAGLDIYGWETDS
GHHDRIGLFVGHTRISGDVKSPTIAGPVADFGDINANGTSLGANWTHVGPGGWYLDAVLM
GTWYGGDVTSSGGENLDVGGTGVTASLEGGYPIALTPEWTLEPQGQLVWQHLSLDDQADS
FSTVSFNSDDVLTGRLGVRLQGLFQTEAATLKPYLKANIWHEFDGEGGISLGGDPIAVET
GGTSVEFGGGVIAKLSEQTSMFATADYTTNIGGEKKRVFEGNVGLSVKW
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatttttcgtccggcaccggcgcgattcggctggctggcatccaccgccatggtt
ttattgggttcgacgcaggcaggctttgccgcctgcgccctgacgccgaccgccggcaac
agtatttatgtctgcgacagtggtgcgagcggagggctgaccgacaccgacggcaccaac
gcgctgaccatgccgggtggtggtaccggcacgatcaatggcaacgtcgtctttggcgga
tttgtcgaccgtgttgaggtccacagcggcgcaatcacaggcaacgtccagcaaggcggc
ggaagcgacgacttcctgatgagcggcggccagatccagtcgctcagccagggtgatggt
ctcgacacattcttcatgtctggcggccgtatcgtcgatttcttcgaagatggcgacacg
gcatacatgaccggcggccgcatcggtcgcgtcaacatgaagctcgacgacaacctgttc
gatatgtctggcggcacgatcgacaagaaccttgtgaccggcttcggcgatgacaccatc
atcctttcaggcggtacgatcggcggcaacatcagcgtcagtggcggcaccgatagcgtg
gctgtgacaggcggctccgtcggcggcagcgtgctgctgagcgtcggcacggacactttc
acctgggacggcggcggtatcatctacggcactgtcgatcttggcggtgacaacgacacg
gcaaagctcagcaatctcagcaacgcaaacatcggtgcgactgttgcggtcaatggcggg
gacggcacggacggcctgactttcgacaatgtatcggcggccggcattgcgcggttccag
aattgggaaaggatcgacgccaccaacgacaccgaactgaccttcgacggtaatcttgtg
ctcggcgacgccggtaccggaaccggtacgctgacggtcgatgccaccagcacccttttc
ggcggtggtcaaaatgcacacgtgctggccgtcagcgggctggcaaacgttatcaatgcc
ggccgcatcgacttgaccaatggcggtggtggcactggcgatacgttcacgatcaatggc
aactaccagggcaatggcggactgctgttcctcgacactgtgctcggcagcgacggctcg
gcctcggacaaactggtgatatccggtggcaccgcgacgggctcgacgggcatcgagatc
gtcaatgccggcggtgccggcggattgactgtcgcggatggcattctggtggtcgaggcg
atcggcggtgcgacgaccggaggtgccttcgcacttgccagtcgagtggccgccggcgcc
tacgagtatatgctgttcaagggcgacgcagcgggtgcaggccaaaactggtatctgcgc
tcgacgatgtcctcgaccagtcccgagccagcgccggggccttctccgatcgaaccgaac
cctcagcctgcgcccgtcgatcccgaaacggcaccaccgccgccgacgtcggcgataccg
ccggtgctgattccgggcgagggcgatcctgttaccccgcccactgacccgaccccgccg
gtgctgccgggggatacgccgcccgaagcaccgccagtaccaccggttaccggcgagccg
acgccgcctccgccgaccgagacgccgcaattggtgctcaacccggccgagtcggcaccg
ctgcccaatcccgaacggctcgaaggaggagcgatgccgctcttccgtggcgaggttccg
acctacgcggtgatctcgccactcgcgcactacctcgccatgtcgacgctgggcacattc
catgagcgccgcggcgagcagcccgaagtgcagggtgccgggcagatgccggctgcatgg
gggcgtgtctttggccagagtgtcgatatgtcctggaccggaaccctgacaccgagcttc
gacggcacgctgttcggcatgcaggccggcctcgacatctatggctgggaaacggatagc
ggccatcacgaccgtatcggcctgtttgtcggccacacgcgcatcagcggcgacgtgaag
tcgccgacgatcgccgggccggtagccgatttcggcgatatcaacgcgaacggcaccagc
ctgggtgccaattggacccatgtcggcccaggcggctggtacctcgatgccgtgctgatg
ggcacctggtacggtggcgatgtcacctccagcggcggcgaaaacctcgacgtcggcgga
accggggtcactgcttcgctggagggcggttatcccatcgcgctgacgccggagtggaca
ctggagccgcagggccagctggtctggcaacatttgtcgcttgacgaccaggccgacagc
ttttcgacggtgtcgttcaattccgacgatgtgctgaccggacggctgggcgtgcggttg
caaggtctcttccagaccgaagccgcgacgctgaagccgtacctcaaggccaacatctgg
catgaattcgacggtgaggggggcatcagcctcggcggcgacccgattgccgtcgagacc
ggcgggacgtcagtcgagttcggcggcggcgtgattgcgaagctgagcgaacagaccagc
atgtttgccaccgctgactacaccaccaatatcggcggcgagaagaagcgcgtctttgaa
ggcaatgtcggtctcagcgtcaaatggtaa
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