Aminobacter niigataensis: AMD1_4242
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Entry
AMD1_4242 CDS
T09606
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
anj
Aminobacter niigataensis
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
anj03400
]
AMD1_4242 (radA)
DNA repair and recombination proteins [BR:
anj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AMD1_4242 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
AAA_30
DnaB_C
Lon_C
DUF7125
AAA_16
AAA_22
RecA_N
nSTAND_NTPase5
AAA_24
nSTAND3
AAA
NTPase_1
SLFN-g3_helicase
MeaB
AAA_5
Glyco_trans_4_4
NPHP3_N
GvpD_P-loop
NACHT
CbiA
ATPase_2
SRP54
AAA_14
HepII_C
AAA_28
MCM
Hpr_kinase_C
AAA_29
DAP3
Zeta_toxin
AAA_33
Fer4_NifH
ABC_tran
NAT10_TcmA_helicase
CobU
HypA
AAA_19
ArsA_ATPase
Elong_Iki1
DUF815
Motif
Other DBs
NCBI-ProteinID:
CAI2935516
LinkDB
All DBs
Position
AMD1:4093844..4095247
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AA seq
467 aa
AA seq
DB search
MAKARVQFICQNCGAAHQRWAGKCDSCGEWNTLVEEGTSGGIGSGPGALKSARKGRPVTL
TSLDGDIEDAPRIVSGIGELDRATGGGFVRGSALLIGGDPGIGKSTLLTQAAAALASRGH
RVVYVSGEEAVAQIRLRAQRLGVASSPVELAAETNVEDILATIADGKRPDLVIIDSIQTL
WTDLADSAPGTVTQVRASSQAMIRYAKSTGAAVVLVGHVTKEGQIAGPRVVEHMVDGVLY
FEGEGGHHFRILRTVKNRFGPTDEIGVFEMSDKGLREVANPSELFLGERHAKAPGAAVFA
AIEGTRPVLVEIQALVAASTLGTPRRAVVGWDSSRLSMILAVLEAHCGVRFGQHDVYLNV
AGGYRISEPAADLAVASALVSSLTGLALPADCVYFGEISLSGAVRPVAHAQQRLKEAEKL
GFGRAVLPAGSGDIAGGIGAGSFQPTALADLVARIAGSRRSRAEETD
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagcgcgcgttcagttcatctgccagaattgcggcgcagcgcaccagcgctgg
gccggcaaatgcgattcctgcggcgagtggaacacgctcgtcgaggaaggcacttccggc
ggcatcggcagcggcccgggcgcgctgaagagcgcccgcaagggccgccccgtcaccctg
acctcgctcgacggcgacatcgaggacgcaccgcgcatcgtctcgggcatcggcgaactc
gaccgcgccaccggcggcggcttcgttcgcggctcagcgctgctgattggtggcgatccc
ggcatcggcaagtcgacgctgctcacccaggcggcggcggcactcgcgtcgcgtggccac
cgcgtcgtctatgtctcgggtgaagaagccgttgcccagatcaggctgcgtgcccagcgc
ctcggcgtcgcctcctcgccggtcgaactcgccgccgagaccaatgtcgaagacatcctg
gccaccattgccgacggcaagcggccggacctggtcatcatcgattcgatccagacgctg
tggaccgaccttgctgattcagcccccggcaccgtcacccaggtgcgcgcctcgtcccaa
gcgatgatccgctacgccaagtcgacaggtgccgcggtggtccttgtcggtcacgtcacc
aaggaaggccagatcgccggtccccgcgtcgtcgagcacatggtcgatggcgttctttat
ttcgaaggcgaaggcggccaccacttccgcatcctgcgcaccgtcaagaaccgcttcggc
ccgaccgacgagatcggcgtcttcgagatgtccgacaagggcctgcgcgaggtcgccaac
ccgtccgaactgttcttgggcgagcgccatgccaaggcaccgggagccgccgtcttcgcc
gcgatcgaaggcacacggccggtgctggtcgagatccaggccctcgtcgctgcctccacg
ctgggtacgccacgtcgtgcggtcgtcggctgggattcgtcgcggctgtcgatgatcctc
gccgtgctcgaggcccattgcggcgtccgattcggccagcacgacgtctatctcaacgtc
gccggcggctaccgcatctccgagccggctgccgatctggcggtcgcttccgcactggtt
tcctcgctcaccggtcttgccctgcccgctgattgcgtctatttcggcgaaatcagcctt
tctggcgccgtgaggccggttgcgcatgcgcagcaacgccttaaagaggccgaaaagttg
ggcttcggaagggcagtcctgcccgccggcagtggggacatcgcaggtggaatcggggcc
ggatcgttccagccgaccgcactcgcggatctggtggcgcggatagccggctcaagacga
agccgagcggaagagacggactaa
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