Aminobacter niigataensis: AMD1_4642
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Entry
AMD1_4642 CDS
T09606
Symbol
hisS
Name
(GenBank) Histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
anj
Aminobacter niigataensis
Pathway
anj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AMD1_4642 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
anj01007
]
AMD1_4642 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
anj03016
]
AMD1_4642 (hisS)
Enzymes [BR:
anj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
AMD1_4642 (hisS)
Amino acid related enzymes [BR:
anj01007
]
Aminoacyl-tRNA synthetase
Class II (A)
AMD1_4642 (hisS)
Transfer RNA biogenesis [BR:
anj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
AMD1_4642 (hisS)
Prokaryotic type
AMD1_4642 (hisS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
tRNA-synt_2b
tRNA-synt_2d
PDZ_6
Motif
Other DBs
NCBI-ProteinID:
CAI2935916
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All DBs
Position
AMD1:complement(4480629..4482146)
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AA seq
505 aa
AA seq
DB search
MADKSEKMKARLPRGFVDRSADDIRVVEKMMAKIREVYELYGFEPVDQPLIEYTDALGKF
LPDQDRPNEGVFSFQDDDEQWLSLRYDLTAPMARFVAENFEKLPKPYRSYRSGWVFRNEK
PGPGRFRQFMQFDADTVGTPGVAADAEMTMMMADVMEALGIKRGDYVIRVNNRKVLDGVL
EAIGLGGDDNANRRLTVLRAIDKLDKFGPEGVKLLLGKGRWDGGKEGEGDFTKGAGLDDA
AINTVIAFTEAGAADSDTTAENLKAIVSGNVRGTEGVEELAQIGSLVAAAGYDDGRIKID
PSVVRGLEYYTGPVYEAELLAEIPNDDGQVVRFGSVGGGGRYDGLVSRFRGEPVPATGFS
IGVSRLMTALKNLGKLDTSDVIAPVVVLVMDKDTESLGRYQKMVADLRRAGVRAEMYLGG
SGMKAQIKYADRRGSGVVVIQGGDERANGQVQIKDLIEGARMSAEITDNAEWRAARPAQI
TVPEVDLVAEVKKILAAQAEERAKL
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaatcggaaaagatgaaagcgcggctgccgcgcggcttcgtcgaccgcagc
gcggacgacatccgggtcgtcgagaagatgatggcgaagatccgcgaggtctacgagctc
tacggttttgagccggtcgatcagccgctgatcgaatacactgacgcgctcggcaaattc
ctgcccgaccaggaccgtcccaacgagggcgtgttctcgttccaggacgacgacgagcag
tggctgtcgctgcgctacgacctgaccgcgccgatggcgcgcttcgttgccgagaatttc
gagaagctgcccaagccctatcgcagctaccgctccggctgggtgttccgcaacgagaag
cccggccccggccgcttccgccagttcatgcagttcgatgccgacaccgtcggcacgccg
ggcgtcgcggcggacgccgagatgaccatgatgatggccgatgtcatggaagcgctcggc
atcaagcgcggcgactacgtcatccgcgtcaacaaccgcaaggtgctcgacggcgttctc
gaggccattggcctcggcggcgacgacaacgccaaccgccggctgaccgtgctgcgcgcc
atcgacaagctcgacaagttcgggcccgagggcgtcaagctcttgctcggcaagggccgc
tgggacggcggcaaggaaggcgagggcgacttcaccaagggcgccggcctggacgatgcg
gcgattaacaccgttattgccttcactgaagccggtgctgccgattccgacaccacggct
gagaacctcaaggccatcgtttcgggcaatgttcgtggcactgaaggcgtggaagaactg
gcccagatcggctcgctggtcgcggcggccggctatgacgacggccgtatcaagatcgac
ccctctgtcgtgcgcggcctcgagtattacaccggtcccgtctacgaagctgagctgctc
gccgaaatccccaatgacgacggccaggtcgtgcgtttcggctccgtcggcggcggcggc
cgctacgacggtctcgtctcgcgcttccgcggcgagccggtgccggccaccggcttttcc
atcggcgtttctcgcctgatgacggcgctgaagaacctcggcaagctcgacacctctgac
gtgattgcgcccgtcgtcgtgctggtcatggacaaggacaccgaaagcctcggccgctac
cagaagatggtcgccgacctccgccgcgccggcgtgcgcgccgagatgtatctcggcggt
tcgggcatgaaggcgcagatcaaatatgccgaccgcaggggctcgggcgtcgtcgtcatc
cagggtggcgacgagcgcgccaatggccaggtccagatcaaggacctgatcgagggcgcc
cgcatgtcggccgaaatcaccgacaatgccgagtggcgcgccgcgcgtccggcccagatc
accgtgccggaagtcgacctcgtcgccgaggtcaagaagatcctcgccgcgcaggcggaa
gagcgggcgaagctgtaa
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