Aminobacter niigataensis: AMD1_4940
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Entry
AMD1_4940 CDS
T09606
Name
(GenBank) 3-ketoacyl-CoA thiolase
KO
K00626
acetyl-CoA C-acetyltransferase [EC:
2.3.1.9
]
Organism
anj
Aminobacter niigataensis
Pathway
anj00071
Fatty acid degradation
anj00280
Valine, leucine and isoleucine degradation
anj00310
Lysine degradation
anj00362
Benzoate degradation
anj00380
Tryptophan metabolism
anj00620
Pyruvate metabolism
anj00630
Glyoxylate and dicarboxylate metabolism
anj00650
Butanoate metabolism
anj00720
Other carbon fixation pathways
anj00900
Terpenoid backbone biosynthesis
anj01100
Metabolic pathways
anj01110
Biosynthesis of secondary metabolites
anj01120
Microbial metabolism in diverse environments
anj01200
Carbon metabolism
anj01212
Fatty acid metabolism
anj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
AMD1_4940
00630 Glyoxylate and dicarboxylate metabolism
AMD1_4940
00650 Butanoate metabolism
AMD1_4940
09102 Energy metabolism
00720 Other carbon fixation pathways
AMD1_4940
09103 Lipid metabolism
00071 Fatty acid degradation
AMD1_4940
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
AMD1_4940
00310 Lysine degradation
AMD1_4940
00380 Tryptophan metabolism
AMD1_4940
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
AMD1_4940
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AMD1_4940
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AMD1_4940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
anj04147
]
AMD1_4940
Enzymes [BR:
anj01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.9 acetyl-CoA C-acetyltransferase
AMD1_4940
Exosome [BR:
anj04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
AMD1_4940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Thiolase_N
Thiolase_C
ketoacyl-synt
Thiolase_C_1
ACP_syn_III_C
Motif
Other DBs
NCBI-ProteinID:
CAI2936214
LinkDB
All DBs
Position
AMD1:complement(4743782..4744990)
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AA seq
402 aa
AA seq
DB search
MADAFVYDAVRTPRGKGKKDGSLHEVPAVRLGAKVLEALRDRNGLDTAQVDDIIFGCVDP
VGEAGSVIPRSAAFEAGYDNKAPGMQISRFCASGLDAINFGAAKIAQGADEIVIAGGVES
MSRVGMGMSGGAWFMDPSVGIPAWFMPQGVSADLIATKYGFSRDDVDGYAVESQKRAARA
WEKGYFKKSVVPVKDQNGLTILDHDEHMRPTTDMQSLGQLNPSFVIPGEMGGFDAIAVQR
YPELEEINHVHHAGNSSGIVDGAAAVLLGSKKAGKTLGLKPRARIRAFSNIGSEPAMMLT
GPVDVTEKLLKRAKMKLSDIDLFELNEAFASVVLRYMQAFDIPHDRINVNGGAIAMGHPL
GATGAMIFGTVLDELERRDLNTALVTLCIGAGMGTATIIERV
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgcttttgtctatgacgccgtgcgcacgccgcgcggcaagggcaagaaggat
ggatcgctgcatgaagtgccggcggtgcgcctcggcgccaaggtgctggaagcgctgcgt
gaccgcaacgggctcgacaccgcacaggtcgacgacatcatcttcggctgcgtcgatcct
gtcggcgaagcgggctcggtgatcccgcgctcggccgcctttgaagccggctacgacaac
aaggcgccgggcatgcagatctcgcgcttctgcgcgtcgggtctcgacgccatcaatttc
ggcgctgccaagatcgcccagggcgccgacgagatcgtcattgccggcggcgtggaatcg
atgtcgcgcgtcggcatgggcatgtcgggcggtgcctggttcatggatccctcggttggc
attccggcctggttcatgccgcagggcgtttccgccgacctgatcgccaccaagtacggc
ttttcccgcgacgacgtcgacggctacgcggtcgagagccagaagcgcgccgccagggcc
tgggagaagggctacttcaagaagtcggtcgtgccggtcaaggaccagaacggcctgacc
atcctcgaccatgacgagcacatgcgcccgaccaccgacatgcagtcgctgggccagctc
aacccgtccttcgtcatccccggcgagatgggcggcttcgacgcgattgccgtccagcgc
tatcccgagttggaagaaatcaaccacgtccaccatgccggcaattcgtccggtatcgtc
gacggtgccgccgccgttctgctcggctcgaagaaggccggcaagacgcttggcctcaag
ccccgcgcccgcatccgcgccttctccaacatcggctccgagccggcgatgatgctgacc
ggcccggtcgacgtcaccgagaagctgctcaagcgcgccaagatgaagctctcggacatc
gacctgttcgagctcaacgaagccttcgcctcggtcgtgctgcgctacatgcaggctttc
gatatcccgcacgacaggatcaacgtcaacggcggcgccatcgccatgggccacccgctg
ggcgccaccggtgcgatgatcttcggcaccgtgctcgacgagcttgagcgccgcgatctg
aacaccgctctcgtgacgctgtgcatcggcgccggcatgggcaccgcaacgatcatcgaa
cgcgtttga
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