Aminobacter niigataensis: AMD1_5149
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Entry
AMD1_5149 CDS
T09606
Name
(GenBank) Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly
KO
K02280
pilus assembly protein CpaC
Organism
anj
Aminobacter niigataensis
Pathway
anj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AMD1_5149
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
anj02044
]
AMD1_5149
02035 Bacterial motility proteins [BR:
anj02035
]
AMD1_5149
Secretion system [BR:
anj02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
AMD1_5149
Bacterial motility proteins [BR:
anj02035
]
Pilus system
Pilus assembly proteins
AMD1_5149
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
BON
Motif
Other DBs
NCBI-ProteinID:
CAI2936423
LinkDB
All DBs
Position
AMD1:complement(4937988..4939505)
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AA seq
505 aa
AA seq
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MRSTARLLVTAATLAIGSVGVWQSPVLAAKARVGAENSSQRVKLGLNKSVVIDLPSDAYD
ILVANPAVADAVTRTARRIYLFGKSVGQTNIFVFGPNGEQIASLDLAIERDVAGLEDYIK
RFIPNSQIKVELINDNVVLTGMVDTPLDAKRAVDLATIFVTGGEATTGQYSQTASGGSEN
GGVDIDNPDSTRQKSKIVNLLQIVGDDQVMLKVTVAEVSRTVMKQLGVNMIGSGDANGIS
WGAISDSIPGLGKPLGASQVSIGTSLLDAYVNAMEQAGVMKTLAEPTLTAVSGEKATFKV
GGEFNLVTNQEGGGSSGGRTYEIEKIEYGIGLEFQPVVLSPGRISLKIRTQVSEPTTEAS
VSLSGGGSRGARFNAPGMTALSIRKRLADTTVELPSGGSMMIAGLVRDDVRQAVNGLPGL
SKIPVLGTLFRSRDFVRNESELVIIVTPYLARPVARNELARPDDNFNAASDGAGMFLGRV
NRVYGTMKTDKPMGRYHGVVGFIYK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaggtccaccgccagacttcttgtgactgctgcgacgttggccataggctccgttggg
gtctggcagtcgccggtacttgctgcaaaggcgagggtcggcgcggaaaattccagccag
cgcgtcaagctcgggctcaacaagtcggtggtcatcgacctgccgtccgacgcctacgat
atccttgtcgccaatccggctgttgccgatgcagtgacgcgcacggcgcgccgcatctac
ctgttcggcaagtcggtcggccaaaccaacatcttcgtcttcggccccaatggcgagcag
atcgccagcctcgatctcgctatcgaacgcgacgttgccgggcttgaggactacatcaag
cgtttcatcccgaattcgcagatcaaggttgaattgatcaacgacaacgtcgtgctgacc
ggcatggtcgatacgccgctcgatgccaagcgcgctgtcgatctggcgaccatcttcgtc
accggcggtgaggcgacgaccgggcaatattcgcagaccgccagcggcggctccgaaaat
ggcggcgtcgacatcgacaatcctgactcgacgcgccagaagagcaagatcgtcaacctg
ctccagatcgtcggcgacgaccaggtgatgctcaaggtcaccgtcgccgaggtcagccgc
acggtgatgaagcagctcggcgtcaacatgatcggctcgggcgatgccaacggcatcagc
tggggggccatcagcgacagcatcccgggtctcggcaagccgcttggcgcctcacaggtc
tcgatcgggacctcgcttctcgacgcgtatgtcaatgccatggaacaggctggcgtgatg
aagacgctggccgagccgacactcaccgcagtttcgggcgaaaaggcgaccttcaaggtc
ggcggcgagttcaacctggtgaccaaccaggaaggcggcggctcaagcggcggccggacc
tacgaaatcgagaagatcgaatacggcatcggtctcgaatttcagccggtggtgctgtcg
ccagggcgtattagtctcaagatcagaacccaggtctccgagccgaccaccgaagcgtcg
gtctcgctgtcgggaggcggatcccgcggagcgaggttcaatgctcctggcatgacggcc
ctgtcgatccgtaagcgcctggccgacacgacggtggagctgccctccggcgggtcgatg
atgattgccggcctcgtccgcgacgacgtgcgtcaggcggtcaacggattgcccgggctg
tccaagattcccgttcttggcaccctgttccgcagccgcgattttgtccgcaacgagtcc
gaactcgtcatcatcgtcacgccgtatctggcccgtccggtggcgcgcaacgagctcgcc
aggcccgacgacaatttcaacgccgccagcgacggcgccggcatgttcctcggccgcgtc
aatcgcgtctacggcaccatgaaaaccgacaagcccatgggccgttatcacggcgtcgtc
ggcttcatctacaaatga
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