Aminobacter niigataensis: AMD1_PA0033
Help
Entry
AMD1_PA0033 CDS
T09606
Symbol
ppsE
Name
(GenBank) Malonyl CoA-acyl carrier protein transacylase
Organism
anj
Aminobacter niigataensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
KR
Acyl_transf_1
Ketoacyl-synt_C
Thioesterase
PS-DH
KAsynt_C_assoc
PP-binding
CurL-like_PKS_C
PKS_DH_N
Beta-ketacyl_N
adh_short
RhiE-like_linker
adh_short_C2
Thiolase_N
Glu_dehyd_C
ACP_SdgA_C
Collagen
Motif
Other DBs
NCBI-ProteinID:
CAI2936467
LinkDB
All DBs
Position
paAMD1:38882..45403
Genome browser
AA seq
2173 aa
AA seq
DB search
MYETDQVSPNDIAIVGMALRVPGARNVREFWENLRGGVESIRDLTEEELLAAGESAARMH
LPNYVRRSSELPGMEMFDADFFGLSPKEAAIMDPQHRHFLECAWEAMEDAGRTPDSSAGP
VGVFAGCGMGSYFYFNVCSNRQLVDQVGMFLLRHTGNDKDFLATRASFAFDLRGPSVNIQ
TACSTSLVAIHTACQSLLAGECEMALAGGVTIELPHRRGYLFQDGEILSTDGHCRAFDHR
ADGTVFGSGAGVVVLRRLSDAIADGDIIHAVIKATAVNNDGSSKAGYLAPSVTGQAEAII
EAQGLAGVSADDIQYVECHGTGTYLGDPIEIEALTQAFRQSTARTGFCRVGSVKSNIGHL
DTAAGVVSLIKTTLALKHGEMPPTLNFEKPNPAIDFARSPFVVNDKLTPWPAAAGPRRAA
VNSLGVGGTNAHAILEVAPKPIVGAAGTGDREPQLFLFATKSRKALDRAMEQIGEEIVRQ
PALPLADVSHTLFAGRKHFEHRRAIAARGRDEAIALLSGSEPRRVHTHSTIEAANAVFLF
PGGGAQHVGMARSLYAEDAGFRATVDEGLNYLTPEAATEIRRVWLAADTDPSQAASDFLR
PSVQLPTILIVEIAIARLWMRWGVKPSALIGHSMGENAAACIAGVMSFRDVVNLVRLRGE
LFDTVEAGGMLSVPLSPEALSEHMNPALDLASVNAPELCVVSGRNGDLEALRLRLAERGI
DASRIAIDIAAHSQMLDPILGQFEAFLRGIDLRAPTIPIVSNLTGEWLSEAQARDPLYWV
RHLRSTVHFAKGLAAVSAQPGRVYVEVGPSRALSSLVKLQPGIEANQVINSLPHPDEATD
DRVHFLAAMGRAWATGLDASIAKLWEGSGARRVSLPTYPFQHQRYFIERSVAAVANENEQ
DFIGKLPDMTDWGFRPSWKQALADVTIDADAQPASWLVFMDDTGLGAALVERLRAKGHRV
ATVKAGDGFVRHDSGDYTLCAEQERPGYDALFSGLAGDGGVPERIVHLWLVTAEETFRPG
SNFFNRNQERGFQSLFFIAQALGDIEGLEPQITVVTNGMQRVGGEALPYPEKATILGPAL
VMPKEMPGATVRLVDLEFSAPSRPEKGGFLRTRTAASDFAASLRDQQLDQLWDDIFAAPT
SETVAHRKGKRWIRNYEKLALGESNADNGLLRTGGVYLITGGLGDLAQVVAGELASRFQA
KLVLTGRHALPPREEWERLAIPLSRNDRIRRAIEAIQSLEAKGADVLYVTADVGNLEDMD
AVADKARATFGDINGVFHAAGLVDDNLIQLKSLDEMEAVLSPKLRGTVVLDQVFRDRPLD
LFVLFSSTSTDTAPAGQVDYVAANAYLNAYADSRFADSSRKTVALHWGVWNAVGLAARAT
GQAGQAGQAGQAGQAGQAGQADAPNSHRGKAQGPIFTDWVEDTSGDVWLETRISPRSHWM
LDEHRLVSGQAILPGTGTIEIIAQAMKEYGVDQGGEIADLFFLRPLEVDDGRDKILRVRL
AAEGERQRVLVTAADAELVSEGFTVHAEATLRKRLAKPHAASDVAAASARLTVGQRAEGE
AALRSVQEDHIHFGARWKVLRSLARGDREAFAELRLDETYRGDIATGFIAHPALLDIATG
FALDLAPGHATSHALWAPMSYGSIALYMKLPEAIVSWARLSEASDLGDGFATFDITIATP
DGSIVVEIERFVMKRLDDDLALAATQRVDRARKPAGDDKEPLSPAALQLAAQVSQGILPA
EGFEALMRALGTGQPQPIVSSMDLGALRKRVSQPRAEAQGAGEVFERPDLDNDYVAPRDE
IERTLAGFWSELLGVEKIGVHDSFFDIGGHSLIAVRLFRMIRKQFAIDLPISVLFEAPTI
EECAALIGEQAAPLSAKTEEAAAPNDKKIEKATHLVTMSAGRSGGGTPFFLCAGMFGNVL
NLRQLAMQLGTDRPVYGLQARGLYGDQEPHDNFVEMARDNLKEVRAVQPHGPYLLGGFSG
GGLVAYEMAQQLLAEGEEVAQLILLDTPLPTQPPLSLLDRLSMKLQDLRRERHNFVASWI
DDRRRWKERVAGRADAEQAEQSSEQFHDLAIENAFRAALPRYELKPYAGSVLLLRPKLNV
IYRLSGGRMLQDGRNVAMEDNGWTPFAAGLTVQEVPGDHDSMVLEPFVRILADRIRKRLK
EPARGLAYGMAAE
NT seq
6522 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaaaccgatcaggtgtcaccgaacgacatcgccattgtcggcatggcgcttcgc
gtgccgggtgcgcgcaatgtccgcgaattctgggaaaacctgcgcggcggcgtggagtcg
atccgcgatttgacggaagaagagctgcttgccgcgggcgagtctgccgcacgcatgcat
ctgcccaactacgtgcgccgcagctccgagcttcccggtatggagatgttcgatgccgac
ttcttcgggctgagccccaaggaagcggcgatcatggacccgcagcaccgccatttcctg
gaatgtgcctgggaggcgatggaagacgccgggcgcacgcccgattcgagcgccggcccc
gtcggcgtcttcgccggctgcggcatgggttcctatttctacttcaacgtctgcagcaat
cgccagcttgtcgaccaggtcggcatgttcctgctacgtcacaccggcaacgacaaggac
ttcctcgccacgcgcgcctcgttcgctttcgacctgcgcggcccgagcgtcaacatccag
acggcatgctcgacctcgctcgtcgcaatccacaccgcctgccagagcctgcttgccggc
gaatgcgaaatggcgctcgccggcggcgtcaccatcgaattgccgcaccggcgcggctat
ctgttccaggacggcgaaattctctctaccgacggccattgccgcgccttcgaccatcgt
gccgacggcacggtgttcggcagcggtgccggcgtggtcgtgttgcgccgcctgtccgac
gccatcgccgatggcgacatcatccacgccgtcatcaaggcgaccgccgtcaacaatgac
ggcagcagcaaggccggctatctcgcgccgagcgtcaccggccaggccgaggccatcatc
gaggcgcaaggtctcgcaggtgtttccgccgacgacatccagtatgtcgagtgccacgga
accggcacgtatctcggcgatccgatcgagatcgaggcgctgacgcaggccttccggcaa
agcaccgcgcgcaccggcttctgccgcgtcggctctgtgaagtcgaacatcggtcacctc
gacaccgctgccggcgtggtcagcctgatcaagaccaccttggcgctcaagcatggcgag
atgccgccgacgctgaatttcgagaagcccaatccggccatcgacttcgcccgcagtccg
ttcgtcgtcaacgacaagctaaccccttggccggcagctgccggaccgcgacgcgcggcg
gtgaactcgctgggcgtcggcggaacaaacgcccatgcgatcctcgaggttgcaccgaag
ccgatagttggtgctgcaggcacgggcgaccgggagccgcagcttttcctgtttgccacc
aagagccgcaaggcgctcgaccgcgccatggagcagatcggcgaggaaattgtccgacag
ccggcgctgccgctcgccgatgtctcccacaccttgtttgccgggcgaaagcacttcgaa
caccgccgcgccatagcggcacgcgggcgcgacgaggcaatcgcccttctctccggttca
gaaccgaggcgcgtccacacccatagcacgatcgaggccgccaacgccgtgttcctgttt
ccgggcggcggcgcgcagcatgtaggcatggcgcgcagcctttacgccgaagacgctggt
ttccgggcgaccgtcgatgaggggttgaactatctcacgccggaagccgcaaccgagatc
cgccgcgtctggctcgcggccgataccgacccgtcgcaagcggcgagcgatttcctccgg
ccttcggtgcagcttcccaccatcctaatcgtcgaaatcgccatcgcacggctgtggatg
cgctggggcgtcaagccctcggcgctgatcggccactccatgggcgagaatgctgccgcc
tgcatcgcaggcgtgatgagcttccgcgacgtcgtcaatctcgtccgcctgcgcggcgaa
ctgttcgacacggtcgaggccggcggcatgctctccgtcccgctgtcgcccgaagctctt
tccgagcacatgaacccggcgctcgacctcgcctcggtgaacgcgcccgagctctgcgtg
gtttcgggccgcaatggggatctcgaagcgctgcgcctcaggctggccgagcgcggtatc
gatgcatcgcgcattgccatcgatatcgctgcgcattcgcagatgctggacccgatcctc
ggacagttcgaagcgttcctgcgcggcatcgacctgcgggcgccgaccatcccgatcgtt
tccaacctcactggcgaatggctcagcgaagctcaggcacgcgacccgctctactgggtc
cggcatcttcgctcgaccgtccacttcgctaagggtctcgccgcggtttcggcgcagccg
gggcgggtctatgtcgaagtaggcccgagccgggctctgtcgtcactggtcaagcttcag
ccgggcatcgaggcgaaccaggtcatcaacagcctgccgcatcccgacgaggctaccgac
gaccgcgtgcatttcctcgccgcgatgggccgtgcctgggcgaccggtctcgacgcgagc
atcgccaagctgtgggagggaagcggcgcgcggcgcgtgtcattgccaacctatccgttc
cagcaccagcgctacttcatcgagcgcagcgtcgcggcggtagccaacgagaacgagcag
gatttcatcggcaagctgcccgacatgacggactggggtttccggccaagctggaaacag
gcattggccgatgtgacgatcgacgccgatgcccagccggcatcctggctggtcttcatg
gacgatactggcctgggtgcagcactggtcgaacggcttcgcgccaagggccatcgcgtt
gcgacggtcaaggccggcgacggtttcgtaaggcacgacagcggcgactacaccctgtgc
gccgaacaggaacggccaggctacgacgcgctgttttcagggctcgccggcgacggcggc
gtccccgagcgcatcgtgcatctctggctggtgacggccgaggaaaccttccgcccgggt
tccaacttcttcaaccgcaaccaggaacgcggcttccagagcctgttcttcatcgcccag
gcgcttggcgacatcgagggcctcgagccgcagatcaccgtcgtgaccaacggcatgcag
cgtgtcggcggcgaagccctgccctatccggaaaaggcaaccatcctcggccccgcgctc
gtcatgccgaaggaaatgccgggcgccacggttcgcctcgtcgaccttgaattttcggcg
ccgtctcggccggagaagggcggcttcttgcggacgcgcacggcagcgagcgactttgcg
gcatcattgcgtgaccagcagctcgaccaattgtgggacgacatcttcgctgcgcccact
tcggaaacggttgcccaccgcaagggcaaacgctggattcgcaactacgaaaagctggca
ctgggcgagtccaatgccgataacggcttgctgcgcacaggcggagtctatctgatcacc
ggtggccttggcgatctcgctcaggtcgtcgccggcgaacttgcatcgcgtttccaggca
aagctggtcctgaccggacggcacgcactgccgcctcgggaggagtgggaaagactggcc
attccgctctcgcgcaacgaccggatacgccgcgccatcgaagcgatccagagcctggag
gccaagggggccgacgtgctctacgtcaccgccgacgtgggcaacctcgaagacatggac
gcagtggccgacaaggcgcgcgccaccttcggcgacatcaacggtgtgttccacgcggcc
ggtctcgtcgacgacaacctgatccagctgaagtcgctggacgagatggaggcggtgctg
tcgccgaagctgcgtggcaccgtggttctcgaccaggtcttccgggacaggccgctcgat
ctcttcgtgctgttttcgtcgaccagcaccgacacggctcccgccggacaggtcgactac
gtcgccgccaatgcctatctcaacgcctatgccgacagccgtttcgcagacagctcacgc
aagaccgtcgcgctccactggggcgtctggaacgctgtcggactggcggcgcgtgccacc
ggccaggccgggcaagcggggcaagcggggcaagccgggcaagccgggcaagccgggcaa
gccgacgcgccaaactcgcatcgtggcaaagcacaaggaccgatcttcaccgactgggtg
gaggacacatcaggcgatgtttggctcgagacgcgcatttcaccgcgcagccactggatg
ctcgacgagcatcgcctggtctcgggacaggccatcttgccgggtaccggcacgattgaa
atcatcgcccaggcgatgaaggagtacggcgtcgatcagggtggggagattgctgatctc
ttcttcctgcgcccgctcgaagtcgatgacgggcgcgacaagatcctgcgcgtgcggctt
gccgccgaaggcgagcggcaaagggtgcttgtcaccgccgccgatgccgaactcgtgtcg
gaaggcttcaccgttcacgccgaagcgacgctacgcaagcgcctcgccaagccacacgcc
gcctctgatgtcgctgccgcctcggcgcgcctgaccgtgggccagcgcgccgaaggcgaa
gctgcgctgcgctcggtacaggaagatcatatccacttcggggcacgctggaaggtgttg
cgctcccttgcccgcggggatcgggaagcctttgccgagctcaggctcgatgagacctat
cgcggcgacatcgccaccggcttcatcgcccatccagcgctgctcgacatcgccaccgga
tttgcgctcgacctggcgcccggccatgcgacatcccacgccctgtgggcgccgatgtcc
tacggcagcatcgcgctctacatgaagttgcccgaggcgatcgtcagctgggcgcggctg
agtgaggcatcggatctcggtgacggattcgcgaccttcgacatcacaatcgccacacca
gacggcagcatcgtcgtggaaatcgagcgtttcgtcatgaagcggctggacgacgacctc
gccttggctgcaacgcagcgcgttgatcgcgcacgcaagcctgcgggcgacgacaaggaa
ccgctgtcgccggcggcactgcagcttgctgcgcaggtcagccagggcatcctgccggcc
gagggcttcgaagccctgatgcgtgcgctcggcaccggccagccgcagccgatcgtgagc
tcgatggatcttggagcgctgcgcaaacgtgtgtcccaaccgcgcgccgaagcgcagggc
gcgggcgaggtcttcgaacgtcccgatctcgacaatgactatgtcgcgccgcgagacgaa
atcgaacgcacgcttgccggattctggagcgaattgctcggcgtcgagaagatcggcgtc
cacgacagcttcttcgacattggcggccattcgctgatcgcggtgcgcctgttccggatg
atccggaagcaattcgcaatcgatctgccgatctccgtgctgtttgaggcgccgacaatc
gaagagtgcgcggcgctgatcggcgagcaagccgcgccgctgtcagccaagacggaagaa
gccgccgctccgaacgacaagaaaatcgagaaggccactcacctggtcacaatgagcgcg
ggacgctcgggcggaggaacaccgttcttcctctgcgccggcatgttcggcaacgtgctc
aatctgcgccagttggccatgcagctcggcaccgaccgcccggtctacgggctccaggcg
cgcggcctctatggcgaccaggagccccacgacaacttcgtcgagatggcacgcgacaat
ctcaaggaggttcgcgccgtccagccgcacggaccctatctgctgggcgggttctccggt
ggtggcctcgtcgcatacgagatggcgcagcagctgctcgccgaaggcgaggaagtcgcg
cagctgatcctgctggacacgcccctgccgacacagccgccgctgtcattgctcgaccgg
ctctcgatgaagctgcaggacttgcgccgggagcggcacaatttcgtcgccagctggatc
gacgatcgccgccggtggaaagaaagagtcgcaggccgcgcggatgccgaacaggccgag
cagtcttccgagcagttccacgacctggcgattgaaaacgccttccgcgccgcattgcca
cgctacgagctcaagccttatgcgggcagcgtgctgctactccggccgaagctcaacgtc
atctatcgtttgagcggcgggcgcatgttgcaggacggccgcaacgtcgcgatggaagac
aatggctggacgccctttgccgccggcttgaccgtgcaggaagtgcccggcgaccacgac
agcatggtgctggagcctttcgtgcgcattctcgccgaccgtatccgcaagcggctcaag
gaaccggcgcgcgggctcgcctacggcatggcggcggaatag
DBGET
integrated database retrieval system
