Aminobacter niigataensis: AMD1_PA0177
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Entry
AMD1_PA0177 CDS
T09606
Symbol
lptB
Name
(GenBank) Lipopolysaccharide export system ATP-binding protein LptB
KO
K01995
branched-chain amino acid transport system ATP-binding protein
Organism
anj
Aminobacter niigataensis
Pathway
anj02010
ABC transporters
anj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AMD1_PA0177 (lptB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AMD1_PA0177 (lptB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
anj02000
]
AMD1_PA0177 (lptB)
Transporters [BR:
anj02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
AMD1_PA0177 (lptB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
BCA_ABC_TP_C
AAA_21
AAA_29
RsgA_GTPase
SMC_N
AAA_33
MukB
AAA_27
AAA_25
MMR_HSR1
AAA_16
AAA_23
AAA
AAA_30
AAA_5
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAI2936611
LinkDB
All DBs
Position
paAMD1:complement(194386..195135)
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AA seq
249 aa
AA seq
DB search
MAEPVLEILELRKTFGALKATDGVSLTLMPGEIHALIGPNGAGKSTLIHQISGSIRPDSG
TIRFLRQDMAGLGMAARARLGLGRSFQISSLVQEFSALRNVMLAVQARQGSSFRFFRPVM
GDPTLTEPAMAMLERVGLAGRAQMPAAELSHGERRQLEIAIALALGSKAFLFDEPMAGMG
PEGSKSLTKFLDGLRHEAPILLVEHDMDAVFALADRISVLVYGRVVATGTVDEIRNDPEV
RRAYLGEAA
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggctgagccggtcctcgaaatcctggagttgcgcaagaccttcggcgcgctgaaggcg
actgacggcgtcagcctaacgctgatgccgggagagatccacgcgctgatcggtcccaac
ggtgcgggcaaaagcacgctgatccaccagatttcgggctcgatcaggccggatagtggc
acgatccgtttcctccgccaggacatggccgggctgggcatggccgcacgcgcccggctg
gggcttgggcgcagtttccagatatcgtcgctggtgcaggaattttcagcgctgcgcaat
gtcatgctggcggtgcaggcgcggcagggttcgagcttccgcttcttccgtcccgtcatg
ggcgatccgacgctgaccgagccggcgatggcgatgttggaacgcgtcggcctagccggg
cgtgcgcagatgcccgccgccgagctgtcgcatggcgagcgccgccagctcgaaatagcc
attgcgctggcgcttggctcgaaagccttcctgttcgacgagcctatggccggcatgggc
ccggaaggctcgaaaagcctgacaaaatttctcgacggcctgcgccacgaggcgccgatc
cttttggtggaacacgacatggatgcggtgttcgcgctcgccgaccgcatctccgttctc
gtctatggccgcgtcgtcgctaccggcacggtggacgagatccgcaacgaccccgaagtc
cgccgggcctatctcggagaagccgcgtga
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