Aminobacter niigataensis: AMD1_PA0237
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Entry
AMD1_PA0237 CDS
T09606
Symbol
lsrB
Name
(GenBank) Autoinducer 2-binding protein LsrB
KO
K10559
rhamnose transport system substrate-binding protein
Organism
anj
Aminobacter niigataensis
Pathway
anj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AMD1_PA0237 (lsrB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
anj02000
]
AMD1_PA0237 (lsrB)
Transporters [BR:
anj02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
AMD1_PA0237 (lsrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_4
AAA_33
Fringe
Motif
Other DBs
NCBI-ProteinID:
CAI2936671
LinkDB
All DBs
Position
paAMD1:complement(260179..261285)
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AA seq
368 aa
AA seq
DB search
MRKIVFSALLALSVSTSLSHAQSVWTGGDDLPTNPLACDATPATAAAKPYDGGQPTNAPD
RKGKTIKVVDVPKLIGIGYFNATSKGIADAAKEMGSMDAKTDGPSKANIDDQVTLIDNYI
TSGVDGILFAANDPVAIAPVLKKALAAGINVVGYDANSTPDARQWFVNQAEFNGIAKAMV
DSMAAEIGDEGAFAIVTSTFTTPNQARWIAEMAAYQAKCHPKMKWLETVEAQEDNILSFN
QSNTLINKYGDELKGIFGMTSVATPAAADAVTQAKKCGSVAVVGLATPNAMKPYVGAGCV
KSVVLWNPVDLGYAAAYVLRATADGTLASGATSVKAGKLGDLSVINGSEILLGAPTVFNK
DNINNFDF
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaaatagtgttttctgcgcttttggccttgtccgtctcgacaagcctcagccat
gcccagtccgtctggacgggcggcgacgacctgcccaccaacccgctggcctgtgacgcc
accccggccactgctgcggccaagccttacgatggcggccagccgaccaatgcgcccgac
cgcaagggcaagacgatcaaggtcgtcgacgtgcccaagcttatcggcatcggctacttc
aatgccacgtccaagggcatcgccgacgcggccaaggaaatgggctcgatggacgccaag
accgacggtccgtccaaggccaacatcgacgaccaagtcacgctcatcgacaactacatc
acctcaggtgtcgacggcatcctgttcgccgccaacgacccggtcgctattgcgccggtg
ctgaagaaggcgctcgccgccggcatcaacgtcgtcggctatgatgccaactcgacgcct
gacgcccgccagtggttcgtcaaccaggccgagttcaacggcatcgccaaggcgatggtc
gactcgatggccgccgaaatcggcgacgagggtgcgtttgccatcgtcacctcgaccttc
accacgccgaaccaggcacgctggatcgccgagatggccgcctaccaggccaagtgccat
cccaagatgaagtggctcgagacggtcgaggcgcaggaagacaacatcctgtccttcaac
cagtcgaacacgctcatcaacaagtatggcgacgagctcaagggcatcttcggcatgacc
agcgtggcgacgccggccgctgccgacgccgtgacccaggccaagaaatgcggcagcgtc
gccgttgtcggcctcgctacgccgaacgcgatgaagccctatgtcggcgccggctgcgtc
aagtcggtggttctgtggaaccctgtcgacctcggctatgccgcggcctacgttctgcgc
gcgacagcggacggcacgctggcatcgggcgcgacctcggtgaaggccggcaagctcggc
gatctctccgtcatcaacggctcggagatcctgctcggcgcgccgacggtgttcaacaag
gacaacatcaacaatttcgacttctga
DBGET
integrated database retrieval system
