Aminobacter niigataensis: AMD1_PA0287
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Entry
AMD1_PA0287 CDS
T09606
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
anj
Aminobacter niigataensis
Pathway
anj00260
Glycine, serine and threonine metabolism
anj00460
Cyanoamino acid metabolism
anj00630
Glyoxylate and dicarboxylate metabolism
anj00670
One carbon pool by folate
anj00680
Methane metabolism
anj01100
Metabolic pathways
anj01110
Biosynthesis of secondary metabolites
anj01120
Microbial metabolism in diverse environments
anj01200
Carbon metabolism
anj01230
Biosynthesis of amino acids
anj01240
Biosynthesis of cofactors
anj04981
Folate transport and metabolism
Module
anj_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AMD1_PA0287 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AMD1_PA0287 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AMD1_PA0287 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AMD1_PA0287 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AMD1_PA0287 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AMD1_PA0287 (glyA)
Enzymes [BR:
anj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AMD1_PA0287 (glyA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotran_1_2
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
CAI2936721
LinkDB
All DBs
Position
paAMD1:complement(314232..315536)
Genome browser
AA seq
434 aa
AA seq
DB search
MNIPTRPGIGSARHFFRTGVAQADPAVSDAMDRELQRQRDEIELIASENIVSKAVLEAQG
SVLTNKYAEGYPGRRYYGGCAYVDEIEDLARERAKTMFNCSFANVQPNSGSQANQAVFMA
LMQPGDTYLGLNLAAGGHLTHGAPVNQSGKWFNPVSYGVKPDTHRIDMDEVRDLAKKHQP
KVILAGGSAYPRIIDFKAFREIADEVGAKLFVDMAHFAGLVAGGVHPNPLEHAHVVTTTT
HKTLRGPRGGMVLSNDEEIGKKINSAVFPGLQGGPLMHVIAAKAVAFGEALTPDFKVYAA
NVVSNAKVLAETLQEGGVDIVSGGTDTHLMLVDLRRKNLTGKAVEASLGRAHITCNKNGI
PFDPQGPMVTSGVRLGTPACTTRGFLAEEFRQVGRMTMAVIDGLAANGEAGNAKIEAAVR
EETHDLVGRFRIYD
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaatattccaaccagacccggcatcggcagcgcccgccacttcttccgcaccggcgtc
gcccaggcggaccccgccgtcagcgatgcgatggatcgcgagctgcagcgccagcgcgac
gagatcgagctgatcgcttcggaaaacatcgtctccaaggcggtgctcgaggcacagggc
tcggtgctgaccaataaatacgccgagggttatcccggccgtcgctattatggcggctgc
gcctatgtcgacgagatcgaggatctggcgcgcgagcgcgccaagacaatgttcaactgc
agctttgccaacgtgcagccgaactcaggcagccaggccaaccaggcagtgttcatggcg
ctgatgcagccgggcgacacctatctcggcctgaaccttgccgcgggcggccatctcacc
cacggcgcgccggtcaaccaatcgggcaagtggttcaacccagtctcctacggcgtgaag
cccgatacgcaccgcatcgacatggacgaggtgcgcgatctcgccaagaagcaccagccc
aaggtcatccttgccggcggctcggcctatccgcgcatcatcgacttcaaggcgttccgc
gagatcgccgacgaggtcggggccaagctgttcgtcgacatggcccacttcgcgggcctg
gtcgccggcggcgtccaccccaacccgctcgaacatgcccatgtcgtgaccaccaccacg
cacaagaccctgcgcggtccgcgcggcggcatggtgctgtccaacgacgaagagatcggc
aagaagatcaattcggctgtcttcccaggcctgcagggcggtccgctgatgcacgtcatc
gccgccaaggcggttgccttcggcgaggcgctgacgcccgacttcaaggtctatgccgcg
aacgtcgtctccaacgccaaagtgttggccgagaccctgcaggagggtggcgtcgacatc
gtctcgggcggtaccgacacgcatctcatgcttgtcgacctgcggcgcaagaacctcacc
ggcaaggcggtggaagcgtccctcggccgggcccacatcacctgcaacaagaacggcatc
ccgttcgatccgcagggtccgatggtcacttcgggcgtccggctgggcacgccagcctgc
acgacccgcggcttccttgccgaggagttccgccaggtcggccgcatgaccatggctgtc
atcgatggccttgcggccaatggcgaggccggcaacgccaagatcgaagccgccgttcgc
gaagaaacccacgatctggtcggtcgattccgaatctacgactga
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