Anaeromyxobacter sp. K: AnaeK_1007
Help
Entry
AnaeK_1007 CDS
T00748
Name
(GenBank) protein of unknown function UPF0027
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
ank
Anaeromyxobacter sp. K
Brite
KEGG Orthology (KO) [BR:
ank00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ank03016
]
AnaeK_1007
Enzymes [BR:
ank01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
AnaeK_1007
Transfer RNA biogenesis [BR:
ank03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
AnaeK_1007
Prokaryotic type
tRNA splicing ligases
AnaeK_1007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
ACG72242
LinkDB
All DBs
Position
complement(1141276..1142739)
Genome browser
AA seq
487 aa
AA seq
DB search
MTARQGEHVPLRRIEGDLWEIPRHGGMKVPGRVYSPGPPAPDDPALQQVANVAHLPGILR
WSLAMPDVHWGYGFPIGGVAAVDGEHGAVSPGGVGYDINCGVRVVTTGLDAEALRPRLHA
LAARIYRDVPTGVGASAAIPRLSPRELDEVLAEGARWAVARGFRAAADDADRCEEGGRLA
GADPAAVSARARERGSDQLGTLGSGNHFLELDRVARIHDDAAAEAFGLFPGQLVVQIHSG
SRGLGYQVCDEALAELAPRLASYGPDYAALPDRQLACAPVGSPEGRRYLAAMQAAANFAW
ANRQVMTGLAVRALLETLGVSDRELGARLLYDVCHNVAKLEDHLVDGGVRRVLVHRKGAT
RAFGPGDPRVPAPYRDVGQPVLIPGDMGRYSYVLAGTEKAMRDTFGSSCHGAGRLLSRGE
ALRRARGRSIARELADRGIEVLARGRKTLGEEMSEAYKDVARVVAVMDGAGISRLVARLD
PLAVVKG
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgcgccagggcgagcacgtgccgctgcggcggatcgagggcgacctgtgggag
atcccgcggcacggcggcatgaaggtgcccggacgcgtctactccccggggccgcccgcc
ccggacgacccggccctgcagcaggtggcgaacgtggcccacctgccggggatcctgcgc
tggtcgctcgccatgcccgacgtccactgggggtacgggttccccatcggcggcgtggcg
gcggtggacggggagcacggcgccgtgtcgccgggcggggtgggctacgacatcaactgc
ggcgtgcgcgtggtcaccaccgggctcgacgcggaggcgctccggccgcggctccacgcg
ctcgcggcccggatctaccgcgacgtccccaccggcgtgggcgcgagcgccgccatcccg
aggctgagcccgcgggagctcgacgaggtgctggcggagggggcgcgctgggcggtggcg
cggggcttccgcgccgcggcggacgacgccgatcgctgcgaggagggcgggcggctcgcc
ggcgcggaccccgccgcggtgagcgcgcgggcccgcgagcgcggcagcgaccagctcggc
acgctcggcagcggcaaccacttcctcgagctggaccgggtcgcccggatccacgacgac
gccgccgccgaggcgttcggcctgttccccgggcagctcgtcgtgcagatccactccggc
tcgcgcggcctcggctaccaggtgtgcgacgaggcgctcgcggagctcgcgccgcggctg
gcgtcctacggcccggactacgccgccctgcccgaccggcagctcgcctgcgcccccgtc
ggcagcccggaggggcgccgctacctcgcggccatgcaggcggcggcgaacttcgcctgg
gcgaaccgccaggtgatgaccgggctggcggtgcgggcgctgctcgagacgctcggcgtc
tccgaccgcgagctgggcgcgcggctcctgtacgacgtctgccacaacgtggccaagctc
gaggaccacctggtggacggcggcgtgcggcgggtgctcgtccaccgcaagggcgccacc
cgcgcgttcggccccggcgatccccgcgtcccggcgccgtaccgcgacgtcggccagccg
gtgctcatccccggggacatgggccggtactcctacgtcctcgccgggaccgagaaggcc
atgcgcgacacgttcggcagctcgtgccacggcgcggggcgcctcctctcgcgcggcgag
gcgctgcgacgcgcccgggggcgctccatcgcgcgggagctggccgatcgcggcatcgag
gtcctcgcgcgggggcgcaagaccctcggcgaggagatgagcgaggcgtacaaggacgtg
gcccgggtggtggccgtgatggacggggcgggcatctcccggctggtggcgcggctcgac
ccgctcgcggtggtcaagggctga
DBGET
integrated database retrieval system
