Anaeromyxobacter sp. K: AnaeK_3142
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Entry
AnaeK_3142 CDS
T00748
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ank
Anaeromyxobacter sp. K
Pathway
ank03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ank00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AnaeK_3142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ank03019
]
AnaeK_3142
03009 Ribosome biogenesis [BR:
ank03009
]
AnaeK_3142
Enzymes [BR:
ank01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AnaeK_3142
Messenger RNA biogenesis [BR:
ank03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AnaeK_3142
Ribosome biogenesis [BR:
ank03009
]
Prokaryotic type
rRNA helicases
AnaeK_3142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
ACG74363
UniProt:
B4UL82
LinkDB
All DBs
Position
3520736..3522433
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AA seq
565 aa
AA seq
DB search
MTFTELGAHPALARALERRGYSEPTTVQEAVFTPALRGRDLLVSSATGSGKTVAYGLVLG
GSLLGDAPAFGPAGAPAGLVVAPTRELAMQVQRELAWLLAEAEGRVVACVGGMDARREAR
ALSDGAHLVVGTPGRLLDHHRRGALDLSELRALVLDEADEMLDMGFRDELEAILAAAPEG
RRTILFSATLPKPIVELARRYTSDPARVAATPAGEAHADITYRAHVVAPSERELAVVNVL
RALEPPRALVFRATREAAHHTASSLSERGFAAVPISGELTQAERNRALVALRDGRARVLV
ATDVAARGLDLPGLDLVLHADLPRDPAALQHRSGRTGRAGRKGLAVLLAAPPERYKLERM
LRDAGVRVEWAPVPAAEAIRASDEARLAGEVDALSEDATDDERAAAARLLSGRDPVLVAA
ALVRSTRARLPSPEDLPETVHAARQAPSPRGERAPRRGPPAEVAWFRINLGREKKADPKW
LLPLLCRRGGVTRDEIGKILIGATETRFEVARAAAARFGATARRPDPRAPGVRIEPVREA
RASGEHRAHAGGERAPRARRPVTRT
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
gtgaccttcaccgagctcggcgcccaccctgccctcgcccgcgcgctggagcgccgcggc
tactccgagccgacgaccgtgcaggaggcggtgttcacgcccgcgctccgcggccgcgac
ctgctcgtctcgtccgcgaccggctcgggcaagacggtcgcctacggcctcgtgctgggc
ggctcgctgctcggcgacgcccccgcgttcggccccgccggcgcccctgccggcctggtg
gtcgcccccacccgcgagctcgccatgcaggtgcagcgcgagctggcctggctgctcgcc
gaggccgaggggcgcgtcgtggcctgcgtgggcggcatggacgcccgccgcgaggcgcgc
gcgctttcggacggggcccacctggtggtggggacgcccggccgcctgctcgaccaccac
cgccgcggcgcgctcgacctgtccgagctgcgcgcgctggtcctggacgaggcggacgag
atgctggacatgggcttccgcgacgagctggaggccatcctcgccgccgcgcccgagggg
cgccgcaccatcctgttctccgccaccctcccgaagcccatcgtcgagctggcccgccgc
tacaccagcgatccggcgcgcgtcgccgccacgcccgccggcgaggcgcacgcggacatc
acgtaccgcgcccacgtggtcgcgccgagcgagcgcgagctggcggtggtcaacgtgctg
cgcgcgctggagccgccgcgggcgctggtgttccgcgccacccgcgaggccgcccaccac
accgcctccagcctgtccgagcgcgggttcgccgccgtcccgatctccggcgagctgacc
caggccgagcggaaccgcgcgctcgtcgccctgcgcgatggccgcgcgcgcgtgctggtc
gcgaccgacgtcgccgcgcgcgggctcgacctgcccggcctcgatctcgtgctccacgcc
gacctcccgcgcgacccggcggcgctgcagcaccggagcggccgcaccgggcgcgccggc
cgcaagggcctggccgtgctgctggccgcgccgcccgagcgctacaagctggagcggatg
ctccgggacgccggcgtgcgggtcgagtgggcccccgtccccgccgccgaggccatccgc
gcgtccgacgaggcgcgcctcgcgggcgaggtggacgcgctgtcggaggacgcgacggac
gacgagcgcgccgccgccgcccggctgctgtcgggccgcgatcccgtgctcgtcgccgcc
gcgctggtccgctccacgcgcgcccggctgccctcgcccgaggacctccccgagaccgtc
cacgccgcccgccaggccccctccccccgcggcgagcgcgcgccgcggcgcggtccgccc
gccgaggtggcctggttccggatcaacctcgggcgcgagaagaaggccgatccgaagtgg
ctgctgccgctcctgtgccggcgaggcggcgtgacccgcgacgagatcgggaagatcctg
atcggcgccaccgagacgcggttcgaggtggcccgcgccgccgcggcgcggttcggcgcg
acggcgcggcgaccggatccgcgcgcgcccggcgtccgcatcgagccggtgcgcgaggcg
cgggcctccggcgagcaccgcgcgcacgcgggcggcgagcgggcgccgcgcgcgcgccgc
cccgtcactcggacctga
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