Anaeromyxobacter sp. K: AnaeK_4038
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Entry
AnaeK_4038 CDS
T00748
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ank
Anaeromyxobacter sp. K
Pathway
ank03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ank00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AnaeK_4038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ank03400
]
AnaeK_4038
Enzymes [BR:
ank01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AnaeK_4038
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AnaeK_4038
DNA repair and recombination proteins [BR:
ank03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AnaeK_4038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_TFIIB
zf_CopZ
RNHCP
Zn_ribbon_SprT
Zn_Ribbon_TF
DZR
AAA_lid_2
DUF7577
Motif
Other DBs
NCBI-ProteinID:
ACG75243
UniProt:
B4UGG1
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All DBs
Position
4562788..4563753
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AA seq
321 aa
AA seq
DB search
MPELPDIEVYVEALAARVLGQPLERIRLGNPFLLRSADPPLAEAEGRRVAAVRRQGKRLV
LALDGDLYLALHLMIAGRLHWKDPGARLPGKAGLAAFDFPNGTLVLTEAGTKRRAALHLV
RGAAALAALDRGGIEPLDVDLAAFAAALRRENHTLKRALTDPSLFSGIGNAYSDEILHRA
RLSPVALTSRLGDAEVARLFEATREVLTGWTARLREEAGSGFPEGVTAFREGMAVHGRHR
QPCPVCGTAVQRIVRAENEVNYCPRCQTGGQILSDRSLARLLKHDWPRTVDELERNPALG
LRPAPGPAGPRSKGPPRRPSR
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
gtgccggagctgccggacatcgaggtctacgtcgaggcgctcgcggcgcgggtgctgggt
cagccgctggagcgcatccggctggggaaccccttcctgctccgctccgccgacccgccg
ctcgcggaggcggaggggcggcgcgtcgccgcggtgcgccggcagggcaagcgcctcgtc
ctggcgctcgacggcgacctctacctggcgctgcacctcatgatcgcgggccggctgcac
tggaaggaccccggcgcgcggctcccgggcaaggcggggctggcggcgttcgacttcccc
aacggcacgctcgtcctcaccgaggccggcacgaagcggcgcgccgcgctgcacctggtg
cgcggcgccgcggcgctcgccgcgctggaccgcggcggcatcgagccgctcgacgtggac
ctcgccgcgttcgccgccgcgctccggcgcgagaaccacacgctgaagcgcgcgctgacg
gacccctcgctcttctccggcatcggcaacgcctactcggacgagatcctgcaccgggcc
cgcctgtcgccggtcgcgctgacctcgcggctcggcgacgcagaggtggcgcgcctgttc
gaggccacgcgcgaggtgctgaccggctggacggcgcggctccgcgaggaggcggggagc
ggcttccccgagggcgtcaccgcgttccgcgagggcatggccgtgcacggacggcaccgc
cagccgtgcccggtgtgcggcaccgcggtgcagcgcatcgtgcgcgcggagaacgaggtg
aactactgcccgcgctgccagaccggcgggcagatcctctcggaccgctccctcgcccgc
ctgctgaagcacgactggccgcggacggtggacgagctggagcgcaacccggcgctcggc
ctccggcccgcgccggggccggccgggccgcgatccaaggggccgccgcgccgcccgtcg
cgctga
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