Anoxybacillus sp. B7M1: GFC29_2349
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Entry
GFC29_2349 CDS
T04426
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
anl
Anoxybacillus sp. B7M1
Pathway
anl02020
Two-component system
anl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
anl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GFC29_2349 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GFC29_2349 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anl03021
]
GFC29_2349 (rpoN)
Transcription machinery [BR:
anl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GFC29_2349 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Sigma70_r4
HTH_23
HTH_Crp_2
HTH_3
LacI
MarR_2
HTH_38
MarR
HTH_32
HTH_11
HTH_21
HTH_17
HTH_Tnp_ISL3
HTH_IclR
GerE
HTH_AraC
HTH_24
HTH_Tnp_4
Xre-like-HTH
HTH_5
DUF6875
PX
3H
TrmB
DUF5370
Motif
Other DBs
NCBI-ProteinID:
ANB63997
LinkDB
All DBs
Position
complement(2379538..2380836)
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AA seq
432 aa
AA seq
DB search
MRAGLFQEQRLHLSLTKELAQAIELLQYSTLELRSFLHEQSLENPFLEIKDHKFVRTPKQ
SRNGETRNWIENIGKSSETLASYLKAQLHAFPLSAKRRQILHYLIASLDEDGYLRMEMKE
TAALLSLSEEELEDAIQFLQSLEPAGVGARSLQECLLIQLQRLPVRHELAERVIADYFTM
FVEKTWKALAKQLKISISNLQEIWDLIRTLEPRPGSHYAAADPHFIVPDLIVTKRDGEIC
VWLNDEFLPEVIWNHAYEKKVADQQDEQIEWFVREKYRQFMWLTKSLEQRKQTLVLVVKE
IMERQKQCLEEGLAALRPLTMRDIADALNIHESTVSRVIRNKYVQTPFGTVELRHFFTNS
LSAENDNEEASAAKTKELIKKLIEAEDKHAPLSDQKIADLLNEEHQIAISRRTVAKYREQ
LHIPSSAKRKRY
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgagagcggggctgtttcaagagcaacgcttgcacctctcattaacaaaggaactggct
caagcgattgaattgctgcagtattcaacgcttgaattgcgctcttttttgcatgagcaa
tctctagaaaatccttttctcgaaatcaaggatcataagtttgttcgtactcctaagcag
tcaaggaacggagaaacacgaaattggattgaaaatatcgggaaatcttccgagacgctt
gcgtcttatttaaaagcccagcttcacgcttttccgttatctgcaaaaagacggcagatt
ttgcattatttaattgcttcacttgatgaggatggatatttgcgaatggaaatgaaagaa
acagcggccctgttgtcgctatcagaagaagaactggaggatgccattcagtttttgcaa
tcgcttgaaccggccggagtgggcgcgcgcagtttgcaagaatgcctgctcatccagctt
cagcgcctgcctgttcgccatgaactagcagaacgggtcatagctgattattttacgatg
tttgttgaaaagacatggaaagcgcttgcgaagcagctgaaaatcagcatatcgaatttg
caggaaatatgggatttaattcgcacgcttgagccgcggccgggcagtcattatgctgcg
gcggatccgcattttatcgtgccggatttgattgttacaaagcgtgatggggagatatgt
gtgtggctgaatgatgagtttcttccagaagtgatttggaatcacgcttacgaaaaaaaa
gtcgccgatcagcaggatgaacaaattgaatggtttgtgagagaaaaataccggcagttt
atgtggctgacaaaaagcttagaacaacgtaaacaaacattggttcttgttgtgaaggaa
atcatggagagacagaagcaatgcctcgaagaagggttggccgcactaagaccattaaca
atgcgcgatattgccgatgcgctgaatattcatgaatctaccgtcagtcgagtgattcgg
aataaatatgtacagacaccgtttggaacagtagagcttcgccatttttttacaaactct
ctttctgcggaaaatgataacgaagaagcatctgcagccaagacgaaagaattgattaaa
aaattgattgaagcagaggataaacatgctcctttatccgatcaaaaaattgctgattta
ttaaacgaagagcaccaaattgctatttccagaagaacagtggccaagtatcgggaacaa
ttgcatattccatcatctgcgaaacgaaaacgatattaa
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