Anoxybacillus sp. B7M1: GFC29_2881
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Entry
GFC29_2881 CDS
T04426
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
anl
Anoxybacillus sp. B7M1
Pathway
anl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
anl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GFC29_2881 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anl03021
]
GFC29_2881 (rpoC)
03400 DNA repair and recombination proteins [BR:
anl03400
]
GFC29_2881 (rpoC)
Enzymes [BR:
anl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GFC29_2881 (rpoC)
Transcription machinery [BR:
anl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GFC29_2881 (rpoC)
DNA repair and recombination proteins [BR:
anl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GFC29_2881 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Peptidase_M23
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ANB63447
UniProt:
A0A160F9I2
LinkDB
All DBs
Position
2922050..2925646
Genome browser
AA seq
1198 aa
AA seq
DB search
MLDVNNFEYMKIGLASPEKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTDPGDTPLEKKQLLSEKEYRAYREKYGSSFQASMGAEAIKKLLQ
DIDLEKEVETLKEELKTAQGQRRARAIKRLEVLEAFRNSGNDPAWMVLDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVERGLAHNIKSAKRKIERVHPEVWDVLESVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTMEREGAVGEGMIFKDTDEALLAYHSGYVHLHTRIAIH
AGSLKNETFTEEQNQKLLITTVGKLIFNEILPKSFPYINEPTQENIEERTPDKYFLDKGV
NVKEEIRKRELVPPFKKKILGNIIAEVFKRFKITETSKMLDRMKDLGFKYSTKAGITIGV
ADIVVLPEKQEILQEAQTKVDTVLKQFRRGLITDEERYERVISVWSAAKDKIQSKLMESL
DKRNPIFMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVREDDCGTDRGMLVKSLTDGTEVIVKLE
ERLVGRYARKTVKHPETGEILVKENEMITEDIANAIIKAGIDQVWIRSAFTCNTRHGVCK
KCYGRNLATGAEVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVQELF
EARNPKGQAVISEIDGVVVAINETRDRQQEIVVKGEVETRTYTAPYNARLKVQEGKQVER
GQELTEGSIDPKELLKVKDITAVQEYLLREVQKVYRMQGVEISDKHIEVMVRQMLRKVRV
IDAGDTDVLPGTLLDVHQFTDANMQVLLEGKRPATARPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMARYRKIKPAVKQHQDEQVTTK
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
ttgctagatgtaaataactttgagtatatgaaaatcggactcgcttcgccggaaaaaatt
cgctcttggtcctatggcgaagtgaaaaaaccagaaacgattaactatcgtacactcaag
cctgaaaaagacgggttgttctgcgagcgcatttttggaccaacgaaagactgggaatgc
cattgtggaaaatataagcgcgtacgttataaaggtgttgtttgcgatcgttgtggtgta
gaagttactcgagcgaaagttcgccgtgagcgtatgggccatattgaactggctgcccct
gtttcgcatatatggtattttaaagggattccgagccgcatgggacttgtcctagacatg
tccccgcgagctttggaagaggtcatttattttgcctcatatgttgttacagatcccgga
gatacaccgcttgagaaaaagcagcttctttccgagaaggagtatcgtgcctatcgtgaa
aaatacggaagctcattccaagcatcaatgggagcagaagccattaaaaagcttttacag
gatattgatcttgaaaaagaagtagaaacattaaaagaagagctaaaaacagcgcaagga
caacggcgcgctcgggcgattaaacgcttagaagtgttggaagccttccgtaattccgga
aatgatccagcatggatggtgcttgacgtacttccggttattccgcctgaattgcgccca
atggttcaattagacggtggccgttttgcgacttcagacttaaatgatttatatcgtcgt
gtcattaaccggaacaatcgcttgaagcgtttattagatctgggtgcgccaagcatcatt
gtgcaaaacgaaaaaaggatgcttcaagaagcggtggatgcgttaattgacaatggacgc
cgtggccgtccggtaacagggccaggaaaccgtccgcttaaatctttatcgcatatgcta
aaaggtaaacaagggcgtttccgccaaaacttacttggtaaacgcgtggactattctggc
cgctctgtaatcgtcgtcggcccgaacttaaaaatgtatcaatgcggtttgccaaaagaa
atggcgctggagctcttcaagccatttgttatgaaagagctggttgagcgtggtttggct
cataatattaaaagcgcgaaacggaaaatcgagcgtgtgcacccggaagtttgggatgta
ttggagtctgtcattaaagaacatccagtgcttttaaaccgtgctccaactttgcataga
cttggaattcaagcgtttgaaccaacgcttgttgaaggacgggcaattcgtctgcatccg
cttgtatgtacagcctataatgcggactttgacggagaccaaatggctgtacacgttccg
ttatcagcagaagcacaagcggaagcgcgtttgcttatgctggcggcccagaacattttg
aacccgaaagatggaaaaccagttgttactccttcacaggatatggtattaggaaactat
tacttgacgatggaacgtgagggtgcggtcggtgaaggaatgatcttcaaagatacagat
gaggcgttgctcgcttaccatagtggctacgtgcatttgcacactcgaattgccatccat
gcgggttcgttaaaaaatgaaacgttcacagaagagcaaaatcagaagttgctcattaca
acagtcggtaagttgatctttaacgaaattctgccgaagtctttcccgtatattaacgag
ccgacacaggaaaatattgaagaaagaacgccggataaatacttccttgataaaggcgta
aacgtaaaagaagaaatccgcaagcgcgagcttgtgcctccatttaaaaagaaaatactc
ggtaatattattgctgaagtatttaaacggttcaaaattacggaaacatctaaaatgtta
gaccggatgaaagatcttggatttaagtattcgacaaaagctggtatcactattggtgta
gccgatatcgtcgtattgccggaaaagcaagaaatccttcaagaagcgcaaacgaaagta
gatacagtgctaaagcagtttagacgcggtttaattacagatgaagagcgttatgaacgt
gtcatttccgtgtggagcgctgcgaaagataaaattcaaagcaagctgatggagtcctta
gataagcgtaacccgatctttatgatgagcgattctggagcgcgtggtaacgcctctaac
tttacacagcttgcaggtatgcgcggattgatggcgaacccggcgggacgcattatcgaa
ttgccgattaaatcatccttccgtgaaggtttaacagtattggagtactttatttccaca
cacggtgcgcgtaaaggacttgctgatacagcattaaaaacagcggattctggttattta
acacgccgacttgtcgacgttgcccaagatgtcattgttcgtgaagatgattgcggtaca
gaccgtggtatgcttgtgaaatcactaactgatggaacagaagtgattgtgaagctagag
gagcgtctagtaggacgctatgcgcggaaaacagtgaagcatccagaaacaggagaaatt
ctagtaaaagagaacgaaatgatcacagaggatattgctaacgctattattaaagccggc
attgatcaagtatggattcgttctgcttttacatgcaacactcgccatggagtatgtaaa
aaatgttatggccgcaaccttgctactggtgcagaagtagaagtaggagaagcagttggt
attatcgctgcccaatccatcggtgaacctggtacacagctaacgatgcgtacattccac
acaggtggggtagcaggagacgatattacacaaggtttgcctcgggttcaggagctattt
gaagcgcgtaatccgaaggggcaagcggtcatctctgaaattgatggtgtcgtcgttgct
attaatgaaacgagagaccgtcaacaagaaatcgtcgtaaaaggcgaggttgagacacgg
acatatacagctccatacaacgcaagattaaaagttcaagaaggaaagcaagttgagaga
ggtcaagagttgacagaaggatcgattgatccgaaggagctcctcaaagtaaaagacatc
acggctgttcaagagtacttattgcgtgaagtgcaaaaagtataccggatgcaaggggta
gaaattagcgataagcatattgaagtgatggtgcgacaaatgcttcgcaaagttcgagtc
attgacgctggagacacagatgtactcccaggtaccttgcttgatgttcatcaatttaca
gatgcgaatatgcaggttctgcttgaaggaaaacgtccagctacggctcgtccggtgctt
cttggtattacaaaagcgtcactcgaaacagattcgttcttatccgctgcttcattccaa
gaaacgacgcgtgtgttaacggatgcagctatcaaaggtaagcgcgatgaattgctgggt
ttaaaagaaaatgtgatcatcggtaagcttgtgccagccggaacgggaatggcgcgttat
cgaaaaatcaagcctgcggttaaacagcatcaggatgaacaagtaacaaccaagtaa
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