Anoxybacillus sp. B7M1: GFC29_3037
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Entry
GFC29_3037 CDS
T04426
Symbol
cshA
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
anl
Anoxybacillus sp. B7M1
Pathway
anl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
anl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GFC29_3037 (cshA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anl03019
]
GFC29_3037 (cshA)
03009 Ribosome biogenesis [BR:
anl03009
]
GFC29_3037 (cshA)
Enzymes [BR:
anl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GFC29_3037 (cshA)
Messenger RNA biogenesis [BR:
anl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GFC29_3037 (cshA)
Ribosome biogenesis [BR:
anl03009
]
Prokaryotic type
rRNA helicases
GFC29_3037 (cshA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
ANB63926
UniProt:
A0A160FAH0
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All DBs
Position
3064562..3065977
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AA seq
471 aa
AA seq
DB search
MTTFQELGLSNELMRAISRMGFEETTPIQAETIPLSLQNKDVIGQAQTGTGKTAAFGIPL
IEKINTKTDVIQGLVVAPTRELAIQVSEELYKIGAVKRVRILPIYGGQDIERQIRALKKR
PHIIVGTPGRIIDHINRKTIRLDHVHTVVLDEADEMLNMGFVDDIEAILSHVPTKRQTLL
FSATMPEPIRRIAERFMDNPQLVKVKAKEMTVPNIEQYYLEVQEKRKFDILTRLLDIQAP
ELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIEILVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGMAMTFVTPRETGQLHNIEKTTK
RKMERMRPPTLDEALEGQQRIAIEKLLAVVESENLSFYKRAAEELLEEHDSVSLVAACIK
MLTKEPDTTPVMLTEEPPLPAKKEKKRINRKGGQPKGAARSPQSKKRRVAR
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
ttgacaacatttcaagagttaggattaagtaatgaattaatgagagctataagtcgaatg
gggtttgaagaaaccactccgattcaagcagagaccattccattaagcctgcaaaataaa
gatgtgattgggcaggcacaaaccgggacaggaaaaacggccgcgttcggtattccgtta
attgaaaaaataaatacaaaaacggacgtgattcaagggcttgtcgttgctccgactcgc
gagcttgccattcaagtatctgaagagctctataaaattggagcggtcaaacgtgttcgt
attcttccaatttatggagggcaggatatcgaacgacaaattcgcgcattgaagaaacgc
ccgcatattattgtgggaacaccaggaagaatcatcgatcatatcaatcgaaaaacgatt
cgtctagatcatgtgcataccgttgtgttagatgaagcagatgaaatgctgaacatggga
tttgttgatgatattgaagcgattttaagccatgtgccgacgaaaaggcagacgcttctt
ttttcagcaacgatgcctgagcctattcgccgcattgcggagcgcttcatggacaatccg
cagcttgtcaaagttaaagctaaagaaatgacggttcccaatattgagcaatactatcta
gaagttcaagaaaaaagaaaatttgatattttaacaaggctgctggatattcaagcgccg
gagctggcgattgtatttggccgtacgaaacggcgagtggatgagctggccgaagcgttg
aatttgcgcggttatgctgctgaaggaatccatggagatttaagccaagcgaagcggctg
tccgtgctgcgcaaatttaaagaaggagcaattgaaattttagtagcgactgatgtagca
gcacgcgggctagatatttccggcgttacacacgtgtataactttgacattccacaggat
ccagaaagctatgttcatcgcatcggccgtacaggccgtgccggaaaaacaggaatggcc
atgacatttgtgacgcctcgcgaaacaggacagctgcacaatattgaaaaaacaacaaaa
cgcaaaatggaacggatgcggccgccgacgctcgacgaagcgctagaagggcagcagcga
attgcaattgagaagctcttggctgttgtggaaagcgagaatttatcgttttacaagcga
gctgccgaggagcttttagaagagcatgattccgtttctcttgtagccgcttgtatcaaa
atgttgacaaaggagccagatacaacaccggtaatgctgacggaagagccgccgctgcca
gccaaaaaagagaaaaagcggatcaatcgcaaaggcggacagccaaaaggggcagcgcga
agcccgcaatcgaaaaagcggcgcgtggcgcgataa
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