Anoxybacillus sp. B7M1: GFC29_418
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Entry
GFC29_418 CDS
T04426
Symbol
sigD
Name
(GenBank) RNA polymerase sigma-D factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
anl
Anoxybacillus sp. B7M1
Pathway
anl02020
Two-component system
anl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
anl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GFC29_418 (sigD)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GFC29_418 (sigD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anl03021
]
GFC29_418 (sigD)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
anl02035
]
GFC29_418 (sigD)
Transcription machinery [BR:
anl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GFC29_418 (sigD)
Bacterial motility proteins [BR:
anl02035
]
Flagellar system
Flagellar assembly proteins
Stator
GFC29_418 (sigD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HNF-1_N
NirdL-like_HTH
UPF0175
CFAP141
Motif
Other DBs
NCBI-ProteinID:
ANB64810
LinkDB
All DBs
Position
416738..417502
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AA seq
254 aa
AA seq
DB search
MTNASARKEQNYWDNWIDKRDPQAGDELVQRYMPLVYYQVQRIAVSLPKTVNKQDLISFG
LMGLYDALERFDPSRDLKFDTYASFRIRGAILDGLRKEDWLPRSTREKAKKIEAAIAKME
QRHMRTVTAKEVADELGMTEEEVCSVMNEGFFANILSLDDWSKENEEEENSPLTLRDEKT
SSPEEAVLRQEMYEQLAAVIKQLNEKEQLVISLFYKEELTLTEIGQIMGLSTSRISQIHS
KAIFKLRKILTQVL
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacgcctcagcgcgcaaggagcaaaattattgggacaattggattgataagcgt
gatccacaagcgggagatgagcttgtacaaagatacatgccgcttgtgtattatcaagta
caacgaattgctgtatcattgcccaaaactgtaaacaaacaagatttaatcagctttgga
ttaatggggctttacgacgcgcttgaaagatttgatccttctcgcgacttaaaatttgat
acgtatgcttcgtttcgaattcgcggcgccattttagacggattgcggaaggaagactgg
ctccctcgcagcacaagagaaaaggcgaaaaaaattgaagccgccattgcgaaaatggag
cagcggcatatgcggacagtgactgccaaagaagtcgcagatgaactaggcatgactgaa
gaagaagtatgttcagtcatgaatgaggggttttttgctaatattttatctcttgatgat
tggtcgaaggaaaacgaagaagaagaaaacagcccgctaacgctgcgtgatgaaaaaacg
tcgtcgcccgaagaggcggttctaagacaagaaatgtatgagcagcttgctgctgttatt
aagcagctaaacgaaaaagaacagcttgtgatcagcttgttttataaagaggagttaacc
ttgaccgaaattgggcaaattatgggattatcgacatcgcggatttcacaaatacattca
aaagcgatttttaaactgcgaaaaatattaacacaagtgttataa
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