Anoxybacillus sp. B2M1: GFC28_103
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Entry
GFC28_103 CDS
T04370
Name
(GenBank) ATP-dependent DNA helicase, RecQ family protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
anm
Anoxybacillus sp. B2M1
Pathway
anm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
anm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GFC28_103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anm03019
]
GFC28_103
03400 DNA repair and recombination proteins [BR:
anm03400
]
GFC28_103
Enzymes [BR:
anm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GFC28_103
Messenger RNA biogenesis [BR:
anm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GFC28_103
DNA repair and recombination proteins [BR:
anm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GFC28_103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
ANB57194
LinkDB
All DBs
Position
95082..96587
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AA seq
501 aa
AA seq
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MNLEQLLEKAFGYRSFRPGQKEIIEDVLKGNDVLAMLPTGGGKSLCYQLPGYIFSGRILI
ISPLVSLMEDQVQQLRKRGEKRVIAINSFLASHLKQAALTDLRPFRFIYASPEILQSPKW
IEALQKAGISLFVVDEAHCISQWGHDFRPDFLKLGHIRHQLGNPPCLALTATAPPEVIND
ILATLQLKKAQLHIHPVDRPNIVMKVECVPSVEEKVERIFHYVKILQGPGMIYVSSRQWA
EVLARKLQVEGMEKVAYYHGGMDAEQRMLIQQQFLCDQLQLVCCTSAFGMGVNKENVRYV
IHFHLPGQIEAYMQEIGRAGRDGKNSVAILLYTHGDEEMVQSLIETELPAREQIRLFIEH
KRSSEPEWSLQVPSTMLGLSDTQWRILQYMFESEQLASQDLEKVEADMLQMIEARRRWKQ
KKLQQMLRWLFHSSCRRQQLLSYFDQRLVQKPSMCCDICGFSLHHYEKRAAQNEDTWTFH
SWQKELQRMFFEMGSLHEQTK
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcttgaacaattattggagaaagcgtttggttatcgttcgtttcgaccgggacaa
aaagaaattatcgaagatgttttgaagggaaacgatgtattggcgatgctgccaacaggt
ggaggaaaatcgctttgctatcagcttcctggttatattttttctggtcgtattttaatt
atttctccgcttgtttcattgatggaggatcaagtacagcagctacgaaagcgcggggaa
aagagagtgattgcgattaatagctttctagcaagccacttgaagcaggcggcactgacc
gatttgcgcccattccgctttatttatgcatctccagaaatattgcaatcaccaaaatgg
atagaagccttacagaaggcgggaatctctttatttgttgtggatgaagctcactgtatt
tcacagtggggacatgatttccgtcctgattttttgaagcttggccatattcgccatcag
cttggaaatccgccttgtttagcattaacggctacagcacctcccgaagttataaatgat
attttagctacattgcagttgaagaaggcacagctgcacattcatcctgtcgatcgtccg
aatattgtgatgaaggtggagtgtgttccatccgttgaagaaaaagtagagaggatattt
cattatgtaaaaatattgcaaggcccaggcatgatctacgtttcaagccgacaatgggcc
gaggtccttgcccgcaaactgcaggtggaaggaatggagaaggtggcctattatcatgga
ggaatggatgcggagcagcgcatgcttattcaacaacagtttttgtgcgatcagctgcag
cttgtctgctgtacaagtgcttttggaatgggcgtaaacaaagaaaatgttcgttatgtg
attcattttcatttgcccggacaaatagaagcgtacatgcaagaaattggacgagcaggc
cgcgatgggaaaaatagtgttgcgattttactgtatacccacggcgatgaggaaatggta
caatcacttatagaaacagagctgccagctcgtgaacaaattcggttgtttatagagcat
aagagatcttcagaacctgaatggtctttgcaggtacctagtacgatgctaggtctgagc
gacacgcaatggcgaattttgcaatacatgtttgaaagtgagcaactagcttcgcaggac
cttgaaaaggtggaagcggacatgttacaaatgatcgaggcaagaaggagatggaagcaa
aaaaagctacagcaaatgctgagatggctgttccattcctcgtgccgccgccaacagctt
ttatcgtattttgatcagcggcttgtacaaaagccaagcatgtgctgtgacatatgcggt
ttttcgcttcatcactatgaaaaacgtgcagcgcagaacgaagacacatggacgttccac
agctggcaaaaagaactgcagcgaatgttttttgaaatggggagccttcatgagcagaca
aagtaa
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