Anoxybacillus sp. B2M1: GFC28_1396
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Entry
GFC28_1396 CDS
T04370
Symbol
rnjA
Name
(GenBank) ribonuclease J 1
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
anm
Anoxybacillus sp. B2M1
Pathway
anm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
anm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GFC28_1396 (rnjA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anm03019
]
GFC28_1396 (rnjA)
Messenger RNA biogenesis [BR:
anm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GFC28_1396 (rnjA)
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GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
DUF4453
Motif
Other DBs
NCBI-ProteinID:
ANB56666
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All DBs
Position
1407828..1409498
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AA seq
556 aa
AA seq
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MMKFLKENQVGVFALGGLGEIGKNTYGVQFQDEIIIIDAGIKFPEDELLGIDYVIPDYSY
LVKNAEKIKGLFITHGHEDHIGGIPYLLRQVNVPIYGGKLALGLIRNKLEEHGLLSQTKL
IEIKEDDVIRFQKTAVTFFRTTHSIPDSYGIVVKTPAGQIVHTGDFKFDFTPVGEPANLT
KMAEIGKEGVLCLLSDSTNSEIPHFTMSERRVGESIHDIFRKVQGRIIFATFASNIHRLQ
QVTEAAVLNNRKIAVFGRSMEAAIEIGQGLGYIKCPKDTFIDAGQINRLPAHRVTILCTG
SQGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTVSVNRTINMLYRAGAEVIHGP
LNDIHTSGHGGQEEQKLMIRLMKPKYFMPIHGEYRMQKMHAKLAVDCGVPEENCFIMDNG
EVLGLSAEEAGIVGKVPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSINMKEFK
IAAGPDIISRGFVYMRESGDLISDAQALITKHLEKVLERKTNQWSEIKNEITDTLAPFLY
EKTKRKPMILPIIMEI
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagtttttaaaagaaaaccaagttggtgtatttgcgctcggcggattaggcgag
atcggaaaaaatacatatggcgtacaattccaagacgaaattattatcattgacgcggga
attaagttcccggaagatgaactgctcggtattgattatgttattcctgattacagttat
ttagtcaaaaatgcagaaaagattaaaggattatttatcactcatggtcatgaagaccat
attggcggtatcccctatttgcttcgtcaagtgaacgttccaatatacggtggaaagctt
gctttaggactcattcgcaataaactagaagagcacggattattaagccaaacaaagctc
attgaaattaaagaggatgatgtgatccgtttccaaaagacagccgttacgtttttccgg
accactcacagcattccggatagctatgggattgtcgtaaaaactccagcggggcaaatc
gtgcatacaggtgatttcaagttcgatttcaccccagtaggtgaaccagccaatttaaca
aaaatggctgaaatcggaaaagaaggtgttctatgcttgctatccgacagcaccaatagc
gaaattccacattttacaatgtcagaacgccgcgtcggtgaaagcatccatgatattttc
cgcaaagttcaaggccggattatttttgccacattcgcttctaacatccatcgtttgcag
caagtaactgaagctgcagtacttaataatcgaaaaatcgctgtattcggccgcagcatg
gaggcagccattgagattggacaaggacttggctacatcaaatgtccaaaggatacattt
attgatgccggacaaatcaatcgcctcccagcccatcgcgtcacgattttatgtacagga
agccaaggagaaccaatggcagcattatctcgcatcgccaacggcacgcatcggcaaatt
caaattattcctggggatacagttgtcttttcatcctccccaatccctggaaacacggtc
agcgtgaaccgtacgattaacatgctgtatcgagccggtgccgaagtgattcatggaccg
ttaaatgatatccatacatccggtcacggtgggcaggaagagcaaaagttaatgattcgt
ttaatgaagccaaaatattttatgccgattcacggagaataccgaatgcaaaaaatgcat
gcgaagcttgctgttgactgcggggttcctgaagagaactgctttattatggacaacggc
gaagtgcttggtctaagtgcagaggaagcagggatcgtcggtaaagttccgtccggatct
gtttatattgatggcagcggcattggagacatcggcaatatcgtgcttcgcgaccgtcgt
attctttctgaggaaggccttgtgattgtcgttgtcagcatcaatatgaaagaattcaaa
atcgcggctggtcccgatatcatttcacgcggttttgtttatatgcgggaatctggcgat
ttaattagcgatgctcaagcattaattacaaaacatcttgaaaaagtgcttgaacggaaa
accaatcaatggtcagaaatcaaaaatgaaatcacagatactcttgcgccgtttttgtat
gaaaaaacgaagcgcaagccgatgattttgccaattattatggagatctaa
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