Anoxybacillus sp. B2M1: GFC28_3652
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Entry
GFC28_3652 CDS
T04370
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
anm
Anoxybacillus sp. B2M1
Pathway
anm03030
DNA replication
anm03430
Mismatch repair
anm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
anm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GFC28_3652 (holA)
03430 Mismatch repair
GFC28_3652 (holA)
03440 Homologous recombination
GFC28_3652 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
anm03032
]
GFC28_3652 (holA)
03400 DNA repair and recombination proteins [BR:
anm03400
]
GFC28_3652 (holA)
Enzymes [BR:
anm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GFC28_3652 (holA)
DNA replication proteins [BR:
anm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GFC28_3652 (holA)
DNA repair and recombination proteins [BR:
anm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GFC28_3652 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DUF1002
Motif
Other DBs
NCBI-ProteinID:
ANB55912
LinkDB
All DBs
Position
3665851..3666900
Genome browser
AA seq
349 aa
AA seq
DB search
MTVNFLGKMIKQTLSPLYLLYGTETFLLNEAYERIVRTALREEEQDFHLSVYDCEETPIE
TAIEEAETLPFFGEKKVVVIKNPYFLTSDKGKEKIEHNLKKLEQYIASPSPFTIVVFLGS
YEKLDERKKITKQLMNEAKVFVASSLNEKELRQWMEERAHANEVAITEEAKKTLLQLAGT
NLMSLANELDKLSLFVGHQGTIDGETVTMLVSRTLEQNVFVLVEKVVQRKVREALQVFGD
LMEHNEEPIKIVALLAAQFRLLYQVKWLNAKGYGQQHIASSLKVHPFRVKLAMAQSGLFS
EQELLDIIHDLAEADYQMKTGVLDKRLLIELLLVKWSKANETNEQSFVR
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgaactttttgggaaaaatgataaagcaaactctgtcgcctctttatttatta
tacggaacggaaacatttttattaaatgaagcatatgaacgaattgtacgtacagcttta
cgagaagaggagcaggattttcatttatcggtgtatgattgtgaagaaacaccgatcgaa
acagcaattgaggaagcggaaaccctgcccttttttggggaaaagaaggttgttgtgatc
aaaaatccgtatttcctcacttctgacaagggaaaggagaaaatagagcataatttaaaa
aagcttgagcaatacatagcttctccttctccttttacgattgttgtttttcttggttca
tatgaaaaattggatgaaagaaaaaaaatcacgaagcagttaatgaatgaagcgaaggtt
tttgtcgcctcctcacttaatgaaaaagaattgcggcaatggatggaagaacgggcacat
gcgaatgaagtcgccattacagaagaagcaaagaaaaccttactgcagctggcggggacg
aacttgatgtcgcttgctaatgaactcgataagctttcactgtttgttggccatcaagga
accattgatggtgaaaccgtgacgatgcttgtttcgcggacacttgaacaaaatgttttt
gtattggtggaaaaggtcgttcaacgcaaagtgagagaagcattgcaagtatttggtgat
ttaatggaacataatgaagaacctattaaaattgttgcgttgctagcggcccagtttcgg
cttttgtatcaagttaaatggcttaatgccaaaggatacggccagcagcatattgcttcg
tcgctaaaggtccatccgtttcgcgttaagctggctatggcacaatcgggattattttcg
gaacaggaattgctcgatatcattcacgacttggctgaagcggattatcaaatgaaaaca
ggggtgcttgataaacgcttgcttattgaattgctgctagtcaaatggagcaaagcgaac
gagacaaatgaacagtcttttgttcggtga
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