Anoxybacillus sp. B2M1: GFC28_3691
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Entry
GFC28_3691 CDS
T04370
Symbol
cshB
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshB
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
anm
Anoxybacillus sp. B2M1
Brite
KEGG Orthology (KO) [BR:
anm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anm03019
]
GFC28_3691 (cshB)
03009 Ribosome biogenesis [BR:
anm03009
]
GFC28_3691 (cshB)
Enzymes [BR:
anm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GFC28_3691 (cshB)
Messenger RNA biogenesis [BR:
anm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GFC28_3691 (cshB)
Ribosome biogenesis [BR:
anm03009
]
Prokaryotic type
rRNA helicases
GFC28_3691 (cshB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
Flavi_DEAD
SPP1_GP23-1
Cas3-like_C_2
DUF7117
DUF6716
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
ANB57819
LinkDB
All DBs
Position
3701480..3702790
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AA seq
436 aa
AA seq
DB search
MKETRFERFAFQPFIIEAIKHLRFYKPTEIQERLIPSILRGESVIGQSQTGTGKTHAYLL
PIIEKIDPSREEVQAVITAPTRELATQIYHEALKMIKHCPPDAVIHARCFIGGTDKQKTI
EKLKKQPQLVIGTPGRINDLLREQALFVHKADMLVVDEADLMLDMGFIFDVDQIAAKMAN
QLQMLVFSATIPEKLKPFLRKYMENPKYVHVAPKQATAEKIEHILVPLRHRDKLKLLYDM
LVAYNPYLAIVFTNTKKMADEVAYALNEKRLRVGVLHGDLTPRERKKIMKQIRDLEFQYI
VATDLAARGIDIEGVSHVINYELPHDLEFYVHRVGRTGRAGYEGVAATIYEPSDYDALAK
LEKMGIEFIQRDLVRGEWTDLPAWNQRSKRTKQAGEIDQLVKKTVKKPKKVKPGYKKKMK
EEMEKQKKRLRRLKNK
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaacacggtttgagaggtttgcatttcagccttttatcatagaagccattaag
cacctgcgcttttataagccaacggaaattcaagagcgcctgattccatcgattcttcgc
ggtgaaagtgtgattggccagtcgcagacagggacaggaaaaactcatgcgtatttattg
ccgatcatagaaaaaatcgatccatcccgtgaagaggttcaagctgtgattacagcgcct
acgcgtgagctagcgacgcaaatttatcatgaggcgttaaaaatgatcaaacattgcccg
ccagatgctgtgattcatgcccgatgtttcatcggtggtacggataagcaaaagacgatt
gaaaaattaaagaagcagccacagcttgttattgggacgcctgggagaattaatgatctg
ctgcgtgaacaggcgttgtttgtccataaggcggacatgcttgtggtcgatgaagcggat
ttaatgctggatatgggatttattttcgatgtcgaccaaattgcagcgaaaatggccaat
caactgcaaatgctcgtattttcagctacgattcctgaaaaattaaagccatttttgcga
aaatatatggagaatcctaaatatgttcatgttgctccgaaacaggcgacggctgaaaaa
attgaacatattctcgttccgcttcgtcatcgtgataaattaaaattgttgtatgacatg
cttgttgcatacaatccgtatttagcgattgtttttaccaacacgaaaaaaatggctgat
gaggtagcttatgccctgaatgaaaaaagattaagggtaggagtgctgcatggggattta
acgccgagagagcgaaaaaaaattatgaagcaaattcgtgatcttgaatttcaatacatt
gttgctacggatttagcggcgcgcggcattgatattgaaggtgtcagtcacgtgattaat
tacgagctgcctcacgatcttgaattttacgtgcatcgcgttggccggactggacgcgct
ggatatgagggagtagcagccacgatttatgagccgtccgattatgatgcattagccaag
ctagaaaaaatgggcattgagtttattcagcgcgatcttgtacgcggagaatggaccgat
ttgccggcatggaatcagcgaagcaaacggacgaagcaagcaggagaaatagatcagctt
gtcaaaaaaaccgtgaagaagccaaagaaagtaaagccgggatacaagaaaaaaatgaag
gaagaaatggaaaagcagaaaaaaaggctgcggcgcctgaaaaataaataa
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