Anabaena sp. YBS01: EH233_08170
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Entry
EH233_08170 CDS
T06262
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ann
Anabaena sp. YBS01
Pathway
ann03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ann00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EH233_08170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ann03019
]
EH233_08170
03400 DNA repair and recombination proteins [BR:
ann03400
]
EH233_08170
Enzymes [BR:
ann01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EH233_08170
Messenger RNA biogenesis [BR:
ann03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EH233_08170
DNA repair and recombination proteins [BR:
ann03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EH233_08170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QFZ11999
UniProt:
A0A5Q0GDC9
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All DBs
Position
1911956..1913401
Genome browser
AA seq
481 aa
AA seq
DB search
MNPHKIKAWEEVRTTFKEIWGYEDFRPPQGEIVGSLLSRKDALIIMPTGGGKSICFQLPA
LLQTGLTLVVSPLVALMENQVQELLQRQQKAALLHSELSTFQRRITLQALEKQQLRLLYL
SPETLLSPPVWERLCQPQLQINGLILDEAHCLVQWGETFRPAYRRLGAVRPALLKHKPPG
TKISIAAFTATADPSAQQTIQTVLQLQQPDIFRLNPYRPNLHPTVRIAWTPKGRKQHLIK
FIQNRPQQAGLIYVRTRRDSEDLAVWLSQMGYATASYHAGLGATERREVEAKWLGGKIPF
VVCTCAFGMGINKPDVRWVVHFHSPHLLSEYVQEIGRGGRDGKPAEALTLVSEPTGWLDA
EDKQRQEFFQEKMRSQQQKAQQLIKKLPQQGEINSVTKQFPDSAVALALLHSSGQLNWLD
PFNYKIEHKAKSQPSKQLQATKQMTQYLNTKQCRWQFLLNAFGFDKEANNWRCGHCDNCR
N
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctcacaaaataaaggcttgggaagaagttcggactacttttaaagagatttgg
ggttacgaagatttccgtccgccacaaggggaaattgttggcagtttattatcccgaaaa
gatgcactaattattatgcctaccgggggcggtaaatcaatttgttttcaattacctgca
ctattacaaacaggtttaactttggtagtttccccgttggtggcgttgatggagaatcaa
gtgcaagaactactccaacgccaacaaaaagcagcactattgcatagtgagttgtccaca
tttcaacgccgcataactctacaagcattagaaaaacaacaactaagattactatattta
tctcctgaaactttattaagtccaccagtttgggaaagattatgtcagccacaactgcaa
ataaatggcttaattttagatgaagcccattgtttagtgcagtggggtgaaacatttcgc
ccggcttaccgcagactaggggctgttagacctgcattgctcaaacataaaccaccagga
actaaaatcagtattgctgcgtttacggctacggctgacccctctgcacaacaaactatt
caaacagttttacaattacagcaaccagatatttttcgcctcaatccttaccgtcctaat
ttgcatcctactgtccgcattgcttggacaccaaagggtaggaaacagcatttaatcaaa
tttattcaaaatcgaccccaacaagcaggattaatttacgtccgcaccagaagagatagt
gaagacttagctgtatggctgtcacaaatgggttacgccacagctagttatcatgctgga
ttaggcgcaacagaacgccgggaagtagaagccaagtggttagggggaaaaattcccttt
gtggtctgtacctgcgcttttggaatggggattaataagccagatgtgcgctgggtagtc
cattttcactcaccacacctattgtctgaatatgtgcaagaaattggtcgtgggggaagg
gatggtaaaccagccgaggcgctgacattggtgagtgaacctacagggtggctagatgca
gaggataaacaaagacaggagttttttcaagagaaaatgcgatcgcaacaacaaaaagcc
cagcaattaatcaaaaaactaccacagcaaggcgaaattaactctgtaactaaacaattt
cctgatagtgctgtagccctagccttactccacagcagtggtcaattaaactggctagat
cctttcaattacaaaatagaacacaaggccaaaagtcagccatcaaaacaattgcaggct
actaaacaaatgactcaatatttaaatactaaacaatgtcgctggcaatttttattaaat
gcttttgggtttgataaagaagcaaataactggcgttgtggacattgcgataattgccga
aattaa
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