Anabaena sp. YBS01: EH233_09570
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Entry
EH233_09570 CDS
T06262
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ann
Anabaena sp. YBS01
Pathway
ann03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ann00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EH233_09570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ann03019
]
EH233_09570
Enzymes [BR:
ann01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EH233_09570
Messenger RNA biogenesis [BR:
ann03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EH233_09570
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
HI1480
CMS1
P-loop_SecA
UTP25_NTPase-like
Motif
Other DBs
NCBI-ProteinID:
QFZ12237
LinkDB
All DBs
Position
complement(2248429..2249709)
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AA seq
426 aa
AA seq
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MSFSHLGLSNEIIRAVTELGYTKPTPIQMQSIPAVLSGRDLLAGAQTGTGKTASFTLPLL
HLLSQDSLKSASSPSSPIRALILTPTRELAAQVESSVRDYGKYLNLNSMVMFGGVSINPQ
KQRLKGRVDILVATPGRLLDHVQQGTVNLSQIEILVLDEADRMLDMGFIRDIRRILSLLP
KQRQNLLFFATFSDKIKELAAGLLNRPQMIEVARRNVTADTVTQKVYKIERDRKRDLLAH
LIRKDNWYQVLVFTRTKYGADRLVKQLGHERIQALAIHGNKSQSARTHALAKFKNGSLQV
LVATDIAARGLDISELPYVVNFDLPYVPEDYVHRIGRTGRAGASGEAVSLVSADEYHLLA
DIEKLIEKRLPFELVAGIGANSQTKPEPSQDERKQKPKDSKHQPRSAAQAVPKKSGKKRL
TNSGKR
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtctttttctcatctcggcttgtccaatgaaattattcgtgctgttactgagttgggg
tacaccaaacctacaccaatccagatgcagtccattcctgctgtcttgtcgggacgtgac
ttgctagctggcgctcaaactggaactgggaaaactgccagctttaccctcccactgcta
catttattatcccaagatagtcttaaaagcgcctccagtccttcctcccccattcgggcg
ctgattctcaccccgactcgtgaacttgccgcacaggtggaatcaagcgtacgtgactac
ggcaagtacttgaacctcaactcaatggtgatgtttggtggagtcagtattaatccccaa
aaacagcgtttaaagggtcgcgtggatattttggttgctaccccagggcgactcctagac
catgtgcagcagggaacggtaaacctttcacagattgagattctcgtgctggatgaagcc
gaccggatgttagatatgggctttattcgtgatatccgtcgtatcctctctttgctgccc
aaacagcgacaaaatttgctattcttcgctacattctcagacaaaatcaaggaactagcc
gccggtctgctaaatcgcccacaaatgattgaagtagcacgccgtaacgttaccgccgat
acggtgacacaaaaagtctacaaaatagagcgcgacaggaaacgagatttacttgctcac
ctgattcggaaagataattggtatcaagtactagtatttactcgcaccaagtatggtgct
gaccgcctggtgaaacaattgggacatgagcgcattcaagctctagctatccacggcaat
aagagccagtcggcacgtacccacgctctggcaaagttcaaaaatggtagtttacaagtt
ttagtggcaactgatatcgccgcgcgggggctggacatcagcgaattgccttatgtggtc
aatttcgatttgccctatgtaccagaagattatgttcatcgcattggtcgcactggtcgt
gctggtgcatcaggtgaggctgtatctttggtgagcgccgatgaatatcatttgttggca
gatattgaaaaactgattgaaaaacgattgccttttgaattggtagcgggtattggagct
aattcccaaactaaaccagaaccaagccaggatgaacgcaagcaaaaacccaaagatagt
aagcatcagcctcgctctgctgctcaagctgtgccaaagaaatcagggaaaaaacgttta
actaattctgggaaaaggtaa
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