Anabaena sp. YBS01: EH233_10945
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Entry
EH233_10945 CDS
T06262
Name
(GenBank) DNA-directed RNA polymerase subunit gamma
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ann
Anabaena sp. YBS01
Pathway
ann03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ann00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EH233_10945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ann03021
]
EH233_10945
03400 DNA repair and recombination proteins [BR:
ann03400
]
EH233_10945
Enzymes [BR:
ann01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EH233_10945
Transcription machinery [BR:
ann03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EH233_10945
DNA repair and recombination proteins [BR:
ann03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EH233_10945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
QFZ12484
UniProt:
A0A5Q0GGA2
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All DBs
Position
2557605..2559482
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AA seq
625 aa
AA seq
DB search
MRPAQTNQFDYVKIGLASPERIRQWGERTLPNGQVVGEVTKPETINYRTLKPEMDGLFCE
RIFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGYIKLAAPVAHVWYLKG
IPSYISILLDMPLRDVEQIVYFNSYVVLSPGNAETLTYKQLLSEDQWLEIEDQIYSEDSQ
LQGVEVGIGAEALLRLLADINLEQEAESLREEIGSAKGQKRAKLIKRLRVIDNFIATGSK
PEWMVMTVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVR
NEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRS
VIVVGPKLKIHQCGLPREMAIELFQPFVINRLIRSGMVNNIKAAKKLISRNDPSVWDVLE
EVIEGHPVMLNRAPTLHRLGIQAFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHVPLS
LESQAEARLLMLASNNILSPATGRPIITPSQDMVLGAYYLTAENPGATKGAGKYFASLDD
VIMAFQQEQIDLHAYIYVRFDGEVESDQPDTDPLEVTNNDDGSRTVLYKYRRVREDAQGN
LISQYVRTTPGRVIYNKAIQEALAS
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgagacccgcccaaactaatcagtttgactacgttaaaatcggcttggcatcaccagaa
cgtattcgccaatggggtgagcgtacattacctaatggtcaggtcgtaggtgaagtcacc
aaaccagaaacgattaattaccggactctcaagccagaaatggatggcttgttttgtgag
cgcatctttggccccgcgaaagattgggaatgccattgcggtaagtataagagagtccgc
catagaggcattgtctgtgagcgttgtggcgtggaagttaccgagtcacgggtacgccgt
caccgtatggggtacatcaaacttgccgcccctgttgcccacgtttggtatctcaaaggg
attcctagctatatttctattctgctagatatgcctttgcgggatgtggagcagattgtc
tatttcaactcttatgttgttctcagtcccggtaatgctgaaaccctaacctacaagcag
ctactgagtgaagaccagtggttagaaattgaagaccaaatctatagtgaagattctcag
ttgcaaggtgtagaagtaggtatcggtgctgaagcactgttgcgcttgctggctgatatt
aatttagagcaagaagcagaaagcctccgggaagaaattggtagtgctaaaggacaaaaa
cgagcaaaactcattaaacgcctgcgggtaattgacaacttcattgctaccggttctaag
ccagagtggatggtgatgacagtgattcccgtaatccctccagatttgcgcccaatggtg
cagttagatggtggacggtttgcaaccagtgacttgaatgatttgtatcgccgggtaatt
aaccggaacaatcgtctagcacgactgcaagaaattctcgcaccggaaattattgtgcgg
aacgaaaagcggatgctgcaagaagcagtagacgctttaattgacaacggtcgtcgcgga
cgcaccgtagttggggcgaacaaccgacccctgaaatctttatctgacattattgaaggg
aagcaagggcgtttccggcaaaacttgttgggtaaacgggttgactactctggacgttct
gtaattgtggttgggcctaagctaaaaattcaccagtgcggcttgcccagagaaatggct
attgaactattccagccatttgtgattaatcgcctgattcgtagcggtatggtgaataac
atcaaagctgcgaaaaagttaatctctcgcaatgaccccagtgtttgggatgtcctggaa
gaagtgattgagggacacccagtcatgctcaaccgcgcgcctaccctacaccgtttgggt
attcaggcttttgaaccaattttggtggaaggtcgagccattcaactccaccccctggtg
tgtcctgcatttaacgctgactttgacggcgaccaaatggcggtacacgtccccctatcc
ttggaaagtcaggcggaagcacggttattgatgctggcttctaacaacattttgtcgcca
gctacaggtagaccaattatcacacctagccaagacatggtgttgggggcttattacctg
actgcggaaaacccaggcgctacaaaaggtgcaggtaaatattttgcttctctggatgac
gtaattatggcattccaacaagagcaaattgacttacacgcttacatctacgtgcggttc
gatggggaagtggaatctgatcagccagatacagaccccctggaagtgacaaataacgat
gatggtagccggactgtactttataagtatcgccgagtcagagaagacgctcagggaaat
ttaatttctcagtatgtacgcactactccaggtcgcgttatttacaataaagcgattcaa
gaagcacttgccagttag
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