Anabaena sp. YBS01: EH233_11610
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Entry
EH233_11610 CDS
T06262
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ann
Anabaena sp. YBS01
Pathway
ann03030
DNA replication
ann03430
Mismatch repair
ann03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ann00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EH233_11610 (holA)
03430 Mismatch repair
EH233_11610 (holA)
03440 Homologous recombination
EH233_11610 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ann03032
]
EH233_11610 (holA)
03400 DNA repair and recombination proteins [BR:
ann03400
]
EH233_11610 (holA)
Enzymes [BR:
ann01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EH233_11610 (holA)
DNA replication proteins [BR:
ann03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EH233_11610 (holA)
DNA repair and recombination proteins [BR:
ann03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EH233_11610 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
AAA_assoc_2
nSTAND1
DNA_pol3_delt_C
Motif
Other DBs
NCBI-ProteinID:
QFZ12606
UniProt:
A0A5Q0GEJ7
LinkDB
All DBs
Position
2708528..2709517
Genome browser
AA seq
329 aa
AA seq
DB search
MPIYVYWGEDDFAIAKAVTTLRDRVLDPLWTSFNYTSFPPEDSEAPIQALNQVMTPVFGA
GGRLVWLMNTNLLQNCPENVLAELTRTLSVIPENSFLLLTCRNKPDERLKSTKLLKQSAT
EFREFPLIPPWKTELLIQAVNQAAQTVGVKLTPKSAELLAEAVGNDTRLLYNEMEKLRLY
AEDNNRPIEENTVTRLVRNTTQNSLQLAAAIRVGDTAKALTILADLINAAEPELRIIATL
IGQFRTWLWVKLMVESGERNPQAIAQAAEIGNPKRIYFLQQEVQSLSLRQLISCLPLLLE
LEVTVKQGRAEISILQIKIIELCQLCQRI
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgccaatttatgtttactggggtgaggatgactttgcgatcgccaaagcagtgacaact
ttacgcgatcgcgtccttgatcctctgtggactagttttaattacactagttttccccca
gaagacagcgaagcacctatccaggcgttaaaccaagttatgacaccggtttttggcgct
gggggaaggttagtgtggctgatgaatactaacctcttacaaaattgtcctgagaatgta
ttggcggaactgacgcgcactttatcagtaattcccgaaaattcttttttattgcttacc
tgtcgtaataaaccagatgaacgcttaaaatccacaaaattactgaagcaatccgccact
gaatttcgagaatttcccctcattccaccgtggaagacggagttactgatccaagctgtg
aatcaagctgctcaaactgtaggagtaaaacttacaccaaaatcagccgaacttttagca
gaagctgtaggtaatgatacacggctgctttacaatgagatggagaaattacgcctgtac
gctgaggataacaatcggcctattgaagaaaatactgttactcggttagtcagaaataca
acccaaaatagcttacaactagccgcagcaattagagtgggcgacacagctaaagctttg
actattttggctgatctcatcaatgctgctgaaccagaattgcggataatagccacctta
attggtcaatttcgcacttggttatgggtgaaactgatggtagaaagtggagaacgcaat
ccccaggcgatcgcccaagctgctgaaatcggtaaccctaaacgtatctactttctccag
caagaagtccaatcactttctctcaggcaattaatttcttgtctaccattattactagag
ttggaggttactgttaaacaaggccgggctgagatatcaatacttcaaattaaaatcata
gaactctgtcaactatgccaacgcatctaa
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