Anabaena sp. YBS01: EH233_15975
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Entry
EH233_15975 CDS
T06262
Name
(GenBank) RNA polymerase sigma factor, RpoD/SigA family
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
ann
Anabaena sp. YBS01
Brite
KEGG Orthology (KO) [BR:
ann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ann03021
]
EH233_15975
Transcription machinery [BR:
ann03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EH233_15975
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Rv2175c_wHTH
CM_1
Motif
Other DBs
NCBI-ProteinID:
QFZ13393
UniProt:
A0A5Q0GHB8
LinkDB
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Position
complement(3779596..3780579)
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AA seq
327 aa
AA seq
DB search
MPTVNTHTEDTNTKFTADMVRTYLREIGRVPLLTREQEIVYGKQVQQMMSLIDAKEALAK
KLDREPSLPEWADHVQKSETEVKQTVTQGKRAKQKMIEANLRLVVAIAKKYQKRNMEFLD
LIQEGTLGLERGVEKFDPMRGYKFSTYAYWWIRQAITRAIAQQGRTIRLPIHITEKLNKI
KKVQRELAQTLGRSPSPAEIAKELELEPAQIREYLNMARQPVSLDVKVGDNQDTELQEML
EDEGPSPEYYTTQEFLRQDLNTLLAELTPQQREVVALRFGLLDGNELSLAKVGERLNLSR
ERVRQLEHQALAHLRRRRANVKEYVAS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgttaacacccacacagaagacacaaataccaaattcacggctgatatggtg
cgaacctatctgcgcgaaattggtcgtgtacccctgctcacccgtgagcaagagattgtt
tacgggaagcaggtgcagcaaatgatgtcgctgattgacgctaaagaggctttagcgaaa
aaattggatcgagaaccgagtttaccagagtgggctgaccacgttcaaaagtctgaaaca
gaggtgaaacagactgtaactcagggtaagcgagccaagcaaaaaatgattgaagcgaac
ctgcgtttggtagtggcgattgccaagaaataccaaaagcggaacatggagttcctagat
ttaatccaagaaggaactctaggactagaaagaggcgtagagaagtttgacccgatgagg
ggttacaaattctcaacctacgcttactggtggattcgccaagcgattacccgtgcgatc
gctcaacaaggtcgtaccatcaggttacctatccatattaccgagaaactaaacaaaatc
aaaaaagttcaacgcgaactagctcaaaccttggggcgttctccttcaccggcagaaatc
gccaaagaactagaactagaacctgctcagattcgtgagtatctgaacatggcgcgtcaa
ccagtttctctcgatgtgaaagttggtgacaaccaggatacagaactgcaagaaatgctc
gaagatgaaggcccatcaccagagtattacaccactcaagaattcttgcgccaagacttg
aatactctcttggcagaactcacaccccaacagcgagaagtcgtagccttgcgctttggc
ttactagacggtaacgaattgtccttggcgaaagtcggtgaacgattgaacctcagtcgt
gaacgcgtccgccaattagaacatcaagcactagctcatctgcgtcgccgtcgagccaat
gtcaaagaatacgtcgccagctaa
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