Anabaena sp. YBS01: EH233_16795
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Entry
EH233_16795 CDS
T06262
Name
(GenBank) RpoD/SigA family RNA polymerase sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
ann
Anabaena sp. YBS01
Brite
KEGG Orthology (KO) [BR:
ann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ann03021
]
EH233_16795
Transcription machinery [BR:
ann03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EH233_16795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r1_2
Sigma70_r4
Sigma70_r4_2
IF2_N
HTH_71
DUF533
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
QFZ13542
UniProt:
A0A5Q0GJN9
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Position
complement(3991563..3992507)
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AA seq
314 aa
AA seq
DB search
MSPQPDSVGIYLREISKYPMLTPEQEITLARQVKQMTVVQQHKQVLEEQLHQQLNIQQLA
ADMGKSETEVFQILRLGQKAKEKMIAANLRLVVAIAKKYRWSQLEFLDLVQEGSIGLQKA
VERFDPNRGYKFSTCAYWWIRQEITKAIANKSTTIRTPSHMNDRLIKLKKVQRELVKILG
REPNIAEIAEFAELEPNQVRECLIAFRHPLSLDRPMGQEDEVDFLEILPADGTSPNEYLD
EGFLRQDLANCLITLKPLQKQVLMLRFGLGSVDKLSTKQIAERLNIKQAKVGTTQKQAIK
VLHRQQPQMREYLA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgtccccccagccagatagcgtaggcatctacttacgagaaatctctaaatatcccatg
ctgactccagagcaagaaattactttggccagacaggtaaagcagatgacagtagttcaa
cagcataaacaagttctcgaagagcaactacatcaacagctaaatatacagcaactggct
gctgacatgggaaaaagcgaaaccgaagtattccagattctgcggttagggcagaaagca
aaagaaaagatgattgcagctaatctgcggttggtggtagcgatcgccaaaaagtatcgg
tggagtcaactagaatttttggatttagtgcaagaaggttctattgggttgcaaaaagca
gtcgagagatttgacccgaatcgcgggtacaagttttcgacctgtgcttactggtggatt
cggcaagaaatcacaaaggcgatcgccaataaatcgaccacaatcagaacaccaagtcac
atgaatgaccgcttgattaaactcaaaaaagtacaacgagaactagtaaaaatcctgggt
cgggagccaaatattgcagaaatagcagaatttgctgaacttgagccaaatcaagtgaga
gaatgtttgatagcgtttcgccatcctctgtctttagatcggccaatgggtcaagaggat
gaagttgactttttggaaattctgcctgctgatggcacttccccaaatgaatacctagac
gaaggatttctacgacaagatttggcgaattgtttgatcacactcaagccactgcaaaaa
caggtgctgatgttgcgctttggtttgggtagtgttgacaagctctcgaccaaacaaatt
gccgaaagactcaacataaaacaagcaaaagttgggacaactcaaaaacaggcgataaaa
gttttgcatcgtcagcaaccgcagatgcgagagtatttggcttga
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