Anabaena sp. YBS01: EH233_24000
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Entry
EH233_24000 CDS
T06262
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ann
Anabaena sp. YBS01
Brite
KEGG Orthology (KO) [BR:
ann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ann03032
]
EH233_24000 (topA)
03400 DNA repair and recombination proteins [BR:
ann03400
]
EH233_24000 (topA)
Enzymes [BR:
ann01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EH233_24000 (topA)
DNA replication proteins [BR:
ann03032
]
Prokaryotic type
DNA Topoisomerases
EH233_24000 (topA)
DNA repair and recombination proteins [BR:
ann03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EH233_24000 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QFZ14817
UniProt:
A0A5Q0GL53
LinkDB
All DBs
Position
5730354..5732540
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AA seq
728 aa
AA seq
DB search
MPKRLLVVESPGKVKKLSQILGSEWIVRASCGHIRELSDEGEDALGFSMDGGSVQCHYVP
RDQRSKETIQQLKSAAKQVSEVVLATDPDREGETIAWHLKEVLGLREPKRVVYTEITASA
VQSAIAHPRKLDLNLVGAGLCRDCLDKLVGYKGSPLVWALNNGAKSVGRVQSSTLHLICQ
REREIQSFVPQDYWSVWVDYVEGFRAFYKGAVNTRSDSPETEVEIHDDAAGNSTTAPEST
RVLAEAEANRLVEEARRHPHQIVQYEGKIANRQPPPPFITSTLQQAAGSKLKFAPEKTMQ
LAQKLYEAGLITYMRTDSVMLSPEFCESARQWLEQNDPQNVPKQVARHRSSKTAQQGHEA
IRPTDVFRPSAQLRIELSTDEFNLYVMIWKRAIASQCRPAQLRKTVVITQSGQILWQARG
QVVEFLGYTRYWPNLSKDTLLPTLQQGQMVTLENAGHEKKQTQPPPRYSEPKLVQLMERK
GIGRPSTYSPTIATLKKRGYVELTKDNLHPTNLGLEVDTFLQKALPDLLEAEFTAKMENA
LDAIAEGKQPWQIYLTTWNQNYFAPALAKAKTIAVDSGNPTKTFPPRQYDTSRTRCPDCN
NFLSKIPSSKLKKKYFLKCTSGCENTVLFWSEFSKTWQAPRTKDDKMAENGQKNHLSPAT
KLPTQLTAYPCPVCKRPLEEYTYTKDGQKKTMLRCSASSSRTDKKHQDVAYFHTAKGWWS
PKFGEINK
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaacgcttgctagtggttgaatctccgggtaaagtgaaaaagctcagtcagatt
ttgggttctgagtggattgtccgtgcttcttgtggacacattcgggaactgagtgatgag
ggtgaggatgctttggggttcagcatggatggtggtagtgtgcagtgtcactacgtaccg
cgtgaccaacgttcaaaagaaactatccagcagttaaagagtgcggcgaagcaggtgagt
gaagttgtgttagcgactgacccggatagggaaggcgaaaccattgcttggcatctcaag
gaagtactgggattgagagaaccgaaacgagttgtctatacagagattacagcctcggcg
gtacagagtgcgatcgctcatccacgcaaactggacttaaatttagtcggggcgggattg
tgtcgagattgtttagataagttggtcgggtataagggtagtcctctggtttgggcgtta
aataatggggcaaagagtgtggggagagtgcagagttctacactccacctgatttgtcaa
cgggagagagaaattcaaagttttgtacctcaagattattggagtgtttgggttgattat
gttgaaggtttccgcgctttctataaaggtgcagtcaacactcgctcagactctccagaa
acagaagtagaaattcatgatgatgcggcgggaaatagcacaactgcgcctgagtctacc
cgcgtgctggcggaagcagaagctaatcgtttagtagaagaagcacgccgtcatccccac
caaattgtgcagtatgagggaaaaattgccaaccgtcaaccacccccaccttttattact
tccaccttgcaacaagcggctggttctaagttgaagttcgcgccagagaagacgatgcag
ctagcccaaaagttgtatgaggctgggttgattacatatatgcggacagactcggtaatg
ttgagtccagagttttgtgaaagtgcgcgtcagtggttggagcaaaatgacccccagaat
gtaccgaagcaggttgcaagacatcgcagtagtaagacagcccaacaaggacacgaagcg
attcgcccaactgatgtgtttcgtccttccgcccagttgcgaatagaactatccacagat
gagtttaacttgtatgtgatgatttggaaacgggcgatcgcttcccaatgtcgtccagcc
caactacgaaaaacggttgtaattacccagtctggtcaaattctctggcaagcaagagga
caagtagtagaatttctcggttacacccgttactggcctaacctcagcaaggataccctc
ttacccaccttgcaacaagggcaaatggtcactttagaaaatgctggtcacgaaaagaaa
caaacccaacccccaccacgctacagcgaacccaagttagtgcaactgatggaacgtaaa
ggtattggtcgtcccagtacctattctcccaccattgccaccctgaagaaacggggttat
gtggaattgaccaaagacaacttacacccaacaaatctagggttagaagttgatactttc
ttacaaaaagccctaccggatttactagaagcggaatttactgccaaaatggagaatgcc
ctagatgcgatcgctgaaggtaaacaaccttggcaaatatacttaaccacttggaatcag
aattattttgcccctgctttagccaaagccaaaaccatagctgtcgattcaggtaatccg
acaaaaacctttcccccgcgtcaatacgatactagccggactcgttgccctgattgtaat
aactttctcagcaaaattcccagcagtaaactgaagaaaaaatacttcctcaaatgcact
agcggttgtgaaaacacagtcttattctggagtgaatttagtaagacttggcaagcgccc
cgaacaaaagatgacaagatggcagaaaatgggcaaaagaatcatctctcacctgcaacg
aaacttcctactcagttgacagcatacccctgtccagtatgtaaaagacctttggaggag
tatacttacaccaaagatggacagaaaaaaactatgctgcgttgctctgcatcctcatct
cgcactgataaaaaacatcaagatgtggcttatttccacactgctaaaggttggtggagt
cctaagtttggggaaataaataaatga
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