Anabaena sp. YBS01: EH233_26745
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Entry
EH233_26745 CDS
T06262
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
ann
Anabaena sp. YBS01
Brite
KEGG Orthology (KO) [BR:
ann00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EH233_26745 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ann03021
]
EH233_26745 (rpoD)
Transcription machinery [BR:
ann03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EH233_26745 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QFZ15309
LinkDB
All DBs
Position
6404091..6405263
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AA seq
390 aa
AA seq
DB search
MNQANNVLDSIYQPDLEIMNQPEIELDDLLIEEDEDLLLADDGDIDEFLEPQTDEDDAKS
GKAAKSRRRTQSKKKHYTEDSIRLYLQEIGRIRLLRADEEIELARKIADLLELERVRERL
SEKLERDPRDSEWAEAVQLPLPAFRYRLHIGRRAKDKMVQSNLRLVVSIAKKYMNRGLSF
QDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETIS
RIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGD
FIESDGETPEDQVSKNLLREDLEKVLDSLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNV
TRERIRQIEAKALRKLRHPNRNSVLKEYIR
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggctaacaacgtactcgatagcatttatcagcctgacctagaaataatgaat
cagcctgaaatcgagttagatgacctcctcattgaagaagatgaggatttgttgctcgct
gatgatggcgacattgatgagtttttagagcctcagactgatgaggacgacgcaaagtct
ggaaaagccgctaagtcgcgtcgtcggacacaaagcaagaaaaagcactacacagaagat
tcaattcgtctgtatttgcaagaaattggtcgaattcgtttgttgcgggcagatgaagaa
attgaacttgctagaaaaatcgctgacttattagaattagaacgggtgcgggagcgactg
tcagaaaagttagaacgtgatccccgtgacagtgaatgggcagaagccgtacaattgccc
ttgccagcctttcgttatcgcttgcacattggccgcagagcaaaagataaaatggtgcaa
tcaaacttgcgccttgtggtttcaattgccaagaaatatatgaatcgtggtttatcattc
caagacttgattcaggaaggtagtctgggtttgattcgtgcggctgagaagttcgatcat
gagaaaggttataagttctccacctacgctacttggtggattcgccaggcaattactaga
gcgatcgctgaccaatcccgcaccatccgcctaccagtccacctctacgaaaccatctcc
cgcattaagaaaaccaccaagttgctgtctcaagaaatgggacgcaaacctacggaggaa
gaaatcgctactcgtatggaaatgaccatcgagaaactgcggttcatcgctaaatctgct
cagttaccaatttcattagaaacacccattggtaaagaagaagattctcgcttaggtgat
tttatcgaatccgacggcgaaaccccagaagaccaggtttctaaaaacctgctaagggaa
gatttagaaaaagtcctcgatagccttagccctcgtgaacgcgatgttctccgcctacgc
tacggtttagatgacggtcggatgaagactttagaggaaattggacaaatcttcaacgtc
acccgtgaacggattcggcaaatcgaagccaaagccctccgtaaattacgccaccccaac
cgcaacagcgtcctgaaagaatatattcgttag
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