Acinetobacter nosocomialis: RR32_03225
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Entry
RR32_03225 CDS
T04196
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ano
Acinetobacter nosocomialis
Pathway
ano03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ano00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RR32_03225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ano03400
]
RR32_03225
Enzymes [BR:
ano01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
RR32_03225
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RR32_03225
DNA repair and recombination proteins [BR:
ano03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RR32_03225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zinc-ribbons_6
Motif
Other DBs
NCBI-ProteinID:
AJB47175
LinkDB
All DBs
Position
complement(667953..668777)
Genome browser
AA seq
274 aa
AA seq
DB search
MPELPEVETTKTSLFPLLNQKVLSVEVRNPSLRWPIPDDIQRLVGQRLIGLNRRSKYILA
EFEQDQMLWHLGMSGSFRLCQPNDELRKHDHLIIQFEDQQLRYHDPRRFGCILWLNPETQ
GKLIDTLGPEPLSTDFHAEYLASKLKNKAVGIKIALMDNHVVVGVGNIYATESLFNVGIH
PAQPAGDLTMQQIEKLVIEIKRILKSAIDLGGSTLRDYSNAMGENGYFQQTLLAYGRAGE
MCVNCETTLENLKLGQRASVFCPQCQPLKKLRKP
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagttacccgaagtcgaaaccaccaaaaccagtttatttcccttattgaatcag
aaagttttaagtgtcgaagtacgtaatcctagcttacgttggccaataccagatgatatt
caaagacttgttgggcaacgtctcattgggttaaatcgacgttcaaaatatattttggca
gagtttgaacaagatcaaatgctctggcatttaggaatgtcaggtagctttcgtctgtgt
caaccaaacgatgaattgagaaagcatgatcatctgattattcaatttgaagatcagcag
ttacgttaccacgacccacgtcgttttggctgcattctttggcttaaccctgaaactcaa
ggcaaactcatcgatactttaggcccagagcctttaagtactgactttcatgcagaatat
ttagcttccaaactcaagaataaagctgtcggcataaaaattgcactcatggataatcat
gtagtggttggtgttggcaatatctatgcaaccgaaagcttgtttaatgttggcattcac
ccagctcagcctgctggcgatttgactatgcaacaaattgagaaactggttatcgagatt
aagcgcattttaaaatcggcaattgatttaggcggctcaactttacgagactacagcaat
gccatgggtgaaaatggttattttcaacagactttactcgcttatggtcgtgccggagaa
atgtgtgttaactgtgaaaccacattagaaaacttaaaactcggtcagcgcgccagtgta
ttttgcccacaatgccaaccgcttaaaaagctgagaaagccttaa
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