Acinetobacter nosocomialis: RR32_06325
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Entry
RR32_06325 CDS
T04196
Name
(GenBank) DEAD/DEAH box helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
ano
Acinetobacter nosocomialis
Pathway
ano03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ano00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RR32_06325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ano03019
]
RR32_06325
Enzymes [BR:
ano01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RR32_06325
Messenger RNA biogenesis [BR:
ano03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RR32_06325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
ERCC3_RAD25_C
Cas3-like_C_2
Glyoxalase
FACT-Spt16_Nlob
YtzH
Motif
Other DBs
NCBI-ProteinID:
AJB47740
LinkDB
All DBs
Position
1331990..1333141
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AA seq
383 aa
AA seq
DB search
MTSGFETLNLHPQLKKAIDALGFTQMTPIQQKVLKYTLAGHDAIGRAQTGTGKTAAFLIS
VINDLLNNPVKEQRFRGEPRALILAPTRELALQIESDAKFLTKFSNLHLVTLLGGVDFYK
QKKQLDANFVDIMVATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRY
SPRKEQRQTLMFSATFSYDVLNLARQWLFEPVTVEIEPEQKTNNDVEQRVYVVAKQDKYR
LLQDILREEPIDKVMIFANRRDQVRRLYDHLKKDGYKVGMLSGEIAQDKRMKMLEQFKQG
KHNIMIATDVAGRGIHVDGVSHVVNFTLPEQSDDYVHRIGRTGRAGAQGVSISFLSEDDA
FYLPEIEKAIGKKLPLTRLDGYC
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacatctggttttgaaaccttgaatttacatccgcaacttaaaaaggcgattgatgct
ttagggtttactcaaatgaccccaattcagcaaaaggttttaaaatatacattagccggg
cacgatgcaattgggcgagcacagacaggaacaggtaagacagctgcctttctgattagt
gtaattaatgatttactcaataatccggttaaagaacaacgtttccgtggcgaacctcgt
gctttaatcttggcgcctactcgtgagttggccttgcaaattgaaagcgatgcaaagttt
ctcacaaaattctctaatttacatttagtgaccctattgggtggtgttgatttttataag
cagaagaagcaacttgatgctaattttgtcgatatcatggttgctacaccaggacgttta
atcgattttgtagaacaaaaagaagtctggctcgatcaaattgaatttttggtgattgat
gaagctgaccgattattagatatgggctttattccttcggtaaaacgtattgttcgttat
tcaccacgtaaggaacaacgtcaaaccctgatgttctcggcgacttttagttacgacgtt
ttaaatttagcaagacagtggttgtttgaacctgtaacagttgaaattgagcctgaacaa
aagactaataacgatgtcgaacaacgtgtttacgttgtggctaaacaagataaatatcgt
cttttacaagatattttgcgtgaagagccaattgataaagtcatgatctttgctaaccgt
cgtgatcaggtgcgccgtctttacgatcatttgaaaaaagatggatataaagtaggtatg
ctatctggtgagattgctcaagataaacgtatgaaaatgttggagcagttcaaacaaggt
aagcataacatcatgattgcaacggatgtcgctggtcgtggtattcacgtagatggcgta
tctcatgtagtcaactttactttacctgagcagtctgatgactatgttcaccgtattggg
cgtacaggtcgtgcaggtgcacaaggggtaagtattagtttcttgtctgaagatgatgct
ttctatttaccagaaattgaaaaagcaattggtaaaaaactaccacttacccgattagat
ggctactgctaa
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