Acinetobacter nosocomialis: RR32_12855
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Entry
RR32_12855 CDS
T04196
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K14159
ribonuclease HI / DNA polymerase III subunit epsilon [EC:
3.1.26.4
2.7.7.7
]
Organism
ano
Acinetobacter nosocomialis
Pathway
ano03030
DNA replication
ano03430
Mismatch repair
ano03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ano00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RR32_12855
03430 Mismatch repair
RR32_12855
03440 Homologous recombination
RR32_12855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ano03032
]
RR32_12855
03400 DNA repair and recombination proteins [BR:
ano03400
]
RR32_12855
Enzymes [BR:
ano01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RR32_12855
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
RR32_12855
DNA replication proteins [BR:
ano03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RR32_12855
RNase H
RR32_12855
DNA repair and recombination proteins [BR:
ano03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RR32_12855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AJB48961
LinkDB
All DBs
Position
2720839..2722218
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AA seq
459 aa
AA seq
DB search
MSQTITLYVDGACRGNPGLGGWGAYVITEQGEHKLFGGEPDTTNNRMELMAAIEGVSFCP
PDAQLIIWTDSNYVKQGITEWIHGWKKKNWKDVKNPDLWQKLDAVCAGRNIEWNWIKGHA
GHPGNEMADQLANLGADKTAQELKQPQSVAAPQDIKKPEQDWLLDDPFGFDLVETTEDED
VAIEPSQEVEMITVDEEVNEVEAVEQETKQQTSKIHPQIVVTEAKLKLQGPRQLILDTET
TGFYFQDGDRIIEVGAIEMINRKLTGSSIHIYINPEKPVGDSENIHGISDDFLKDKPLYA
DIADTLFEYLKGAEIIAHNATFDMNFLDMEFRRVGLPALSEVCEVTDTLALAKNKHPGQK
NSLDALVRRYEIPARDRTFHGALLDAEILSDVYLAMTGGQVSFDMDALSQSESDQQKTTK
ARIQIDLPVIYPSDEELNIHETWVKEFEKKHGEPCLFAK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaacaatcacactgtatgttgatggtgcatgtcgtggcaatcccggtttaggc
ggttggggtgcatatgtcattaccgaacagggtgaacataaattatttggcggcgaaccc
gacacaaccaataaccgcatggagcttatggctgctattgagggcgtttctttttgccct
cctgatgcacaattaattatctggacagactcaaattatgtaaagcaaggcattacagag
tggattcatggctggaaaaagaaaaattggaaagatgttaaaaatcctgacctatggcaa
aaacttgatgctgtttgcgcaggtagaaatattgagtggaattggattaaaggccatgca
ggacatcctggcaatgaaatggcagaccaacttgcaaatttaggtgcagataagactgct
caagaactcaagcaaccacagtctgtcgctgcaccgcaagatataaaaaagcctgaacag
gactggttgctagatgatcctttcgggtttgatctagttgaaacaaccgaagatgaagat
gtcgctattgaaccatcacaagaagttgagatgattactgtcgacgaagaagtaaatgag
gttgaagctgtagagcaagaaacaaagcagcaaactagcaagattcatccacagattgtt
gttaccgaagcaaagcttaaattacaaggccctcgtcagctcattctcgatactgaaacg
actggtttctatttccaagatggtgaccgcattattgaagtcggcgcaatcgaaatgatt
aaccgtaagcttacgggtagttcgattcacatctatattaaccctgaaaaaccagtgggc
gattcagaaaacattcacggtattagtgatgatttcttaaaagataaaccgctctatgca
gacattgcagatactttgtttgagtatctaaagggcgcagaaattatcgctcataacgca
accttcgatatgaacttcctcgatatggagtttagacgtgttgggttacctgctctttca
gaagtttgtgaagttaccgataccttagctttagccaaaaataagcatcctggacagaaa
aactcacttgatgccttagtccgtcgttatgaaattccagcgcgtgatcgtaccttccat
ggtgcgttactcgatgctgaaattctttctgatgtttacttggcaatgactggtggtcaa
gtttcctttgatatggatgcgctctctcaaagtgaaagtgatcaacaaaaaacaaccaaa
gctagaattcaaattgatttacccgttatttacccttcagatgaagagttgaacatacat
gagacttgggtcaaagaatttgagaaaaaacatggagaaccttgcctttttgcaaaataa
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