Acinetobacter nosocomialis: RR32_16635
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Entry
RR32_16635 CDS
T04196
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
ano
Acinetobacter nosocomialis
Pathway
ano03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ano00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RR32_16635 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ano03021
]
RR32_16635 (rpoB)
03400 DNA repair and recombination proteins [BR:
ano03400
]
RR32_16635 (rpoB)
Enzymes [BR:
ano01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RR32_16635 (rpoB)
Transcription machinery [BR:
ano03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RR32_16635 (rpoB)
DNA repair and recombination proteins [BR:
ano03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RR32_16635 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
AJB49660
UniProt:
A0A0A7XPB5
LinkDB
All DBs
Position
complement(3545380..3549468)
Genome browser
AA seq
1362 aa
AA seq
DB search
MAYSYTEKKRIRKNFGKLPQVMDAPYLLSIQVDSYRTFLQDGKTPKNREDIGLQAAFRSV
FPIESYSGNAALEFVEYSLGKPEFDVRECILRGSTYAAPMRVKIRLIIKDRETKSIKDVR
EQEVYMGEIPLMTENGTFVINGTERVIVSQLHRSPGVFFDHDKGKTHSSGKVLYSARIIP
YRGSWLDFEFDAKDLVYVRIDRRRKLLATVVLRALGYNNEQILNLFYEKVPVYLDMGSYQ
IDLVPERLRGEMAQFDIADNEGKVIVEQGKRINARHVRQMEAAGLTKLSVPDEYLYERIT
AEDITLRDGEVIAANTLLSHEVMVKLAEGGVKQFNILFTNDIDRGSFVADTLRADTTAGR
EEALVEIYKVMRPGEPPTKEAAENLFNNLFFSSERYDLSPVGRMKFNRRLGRPYEVGTDQ
KSREVEGILSHEDIIDVLRTLVEIRNGKGEVDDIDHLGNRRVRSVGEMTENQFRVGLVRV
ERAVKERLSQAETDNLSPQDLINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEITHKRRVS
ALGPGGLTRERAGFEVRDVHQTHYGRVCPIETPEGPNIGLINSLSVYAKANDFGFLETPY
RKVVDGRVTDDVEYLSAIEEVGTVIAQADSAVDKDGNLTEEFVSVRHQGEFVRMPPEKVT
HMDVSAQQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRADKPLVGTGMEANVARD
SGVCVIANRGGAIEYVDASRIVIRVNEDEMVAGEAGVDIYNLIKYTRSNQNTCINQNVIV
NLGDKVARGDILADGPSTDMGELALGQNMRVAFMTWNGYNYEDSILLSERVLQEDRLTSI
HIQELSCVARDTKLGAEEITADIPNVGEAALSKLDESGIVYIGAEVTAGDILVGKVTPKG
ETQLTPEEKLLRAIFGEKAADVKDSSLRVPSGTKGTVIDVQVFTRDGLEKDDRALAIEKA
QLDSYRKDLKEEYKIFEEAARERVIRLLKGQESNGGGSTKRGDKLSEDLLSGLELVDLLE
IQPTDEAIAERLTQIQVFLKEKSAEIDEKFAEKKRKLATGDELTTGVLKVVKVYLAVKRR
IQPGDKMAGRHGNKGVVSNILPVEDMPHDANGVPVDIVLNPLGVPSRMNVGQILETHLGM
AAKGLGDKIEKMLKEQRTVLELREFLDKIYNKVGGEQEDLDSLTDDEILALSGNLRAGVP
LATPVFDGAEESQIKDLLELADISRTGQTVLFDGRTGEQFDRPVTVGYMYMLKLNHLVDD
KMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVEGR
TRIYKNIVDGNHYMDPGMPESFNVLTKEIRSLGINIELKNGD
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggcatactcatataccgaaaagaaacggatccgtaagaattttggtaaattgccccaa
gtaatggatgcaccgtacttactatcgattcaggtcgattcgtacagaacattcttgcaa
gatggcaaaactccaaaaaaccgcgaagatatcggtctccaagccgcatttcgttcagtt
tttcctatcgaaagttattctggcaatgctgctttagaatttgttgagtatagccttggt
aaacctgagttcgatgtacgcgaatgtattcttcgtggttcgacttatgcggcaccaatg
cgcgttaaaattcgtttgattattaaagatcgcgaaactaaatcaattaaagacgtacgt
gaacaagaagtctatatgggtgaaattccactcatgactgaaaacggtacctttgttatc
aatggtactgagcgtgtaatcgtatctcaattacaccgttcaccaggcgtattctttgac
catgataaaggtaagactcactcaagtggtaaagtgttgtattcagcacgtatcattcct
taccgtggttcatggttagactttgaatttgatgcaaaagaccttgtttacgtacgtatt
gaccgtcgtcgtaaattacttgctactgttgtgttacgtgcactaggttataacaatgaa
caaatcttgaatttgttctacgaaaaagtacctgtgtatcttgacatgggcagctatcaa
attgaccttgttcctgagcgtttacgtggtgaaatggctcaatttgatattgctgacaat
gaaggtaaagtcattgttgagcaaggcaaacgtattaatgcgcgtcacgtacgtcaaatg
gaagctgcaggtttaactaaactttcagttcctgatgaatacttatatgaacgtattacg
gctgaagatattactttacgtgatggtgaagtaattgctgcaaatacgttgttaagccat
gaagtaatggtgaagttggcagaaggtggtgttaaacaatttaacatcctattcacaaat
gacatcgaccgtggttcatttgttgctgatacattgcgtgcagacacaacagcgggacgt
gaagaagcattagtagaaatctacaaagtgatgcgtccaggcgagccgccaacaaaagaa
gctgctgaaaacctattcaataacttattcttctcttctgagcgttatgacttatctcca
gtaggtcgtatgaagttcaaccgtcgtctaggacgtccttacgaagttggcactgatcaa
aaatctcgtgaagttgaaggtattttatcgcacgaagatatcatcgatgtattacgtacg
ttggttgaaatccgtaacggtaaaggcgaagtagacgatatcgaccatttaggtaaccgt
cgtgtacgttctgttggtgaaatgacagagaaccaattccgtgttggtttagtacgtgtt
gagcgtgctgttaaagagcgtttaagccaagcagaaactgataacttgtctccacaagac
ttgattaatgctaagccagttgctgctgcaatcaaagaattctttggttcaagccagtta
tctcaattcatggaccaaaacaacccattatctgagattacacataagcgtcgtgtatct
gcgcttggcccaggtggtttaacacgtgaacgtgcaggctttgaagtacgtgacgtacat
caaactcactatggtcgtgtgtgtccaattgaaacgcctgaaggtccaaacattggtttg
attaactcgctttctgtatatgcaaaagcgaatgacttcggtttcttggaaacaccatac
cgtaaagttgtagatggtcgtgtaactgatgatgttgaatatttatctgcaattgaagaa
gtaggtactgttattgcacaggccgactcagcagtagataaagatggcaacttaacagaa
gaatttgtttctgttcgtcaccaaggtgaattcgtacgtatgccacctgaaaaagtgacg
catatggacgtttctgcacagcaggttgtatctgttgctgcatcacttattccattcctt
gaacacgatgacgcgaaccgtgcattgatgggttcgaacatgcaacgtcaggctgttcct
actttacgtgctgacaagcctcttgttggtactggtatggaagcgaacgtagcacgtgat
tcgggtgtgtgtgtaatcgcaaaccgtggtggtgcaattgaatatgtagatgcttctcgt
atcgttattcgtgtaaacgaagatgaaatggttgcaggtgaggcaggtgtagatatctat
aacctcatcaaatatacacgttcgaaccaaaatacttgtattaaccaaaatgttatcgtg
aatttgggcgacaaagttgctcgtggtgacatcttggcagatggtccgtcaacagacatg
ggtgaacttgcgcttggtcaaaacatgcgtgtagcgttcatgacatggaatggttacaac
tatgaagactcgatcttattatctgagcgtgttcttcaagaagaccgtttaacttctatt
catattcaagaattgtcatgtgtggcacgtgatactaagttaggtgcagaagaaattact
gccgatattcctaacgtaggtgaagctgcgctttctaaacttgatgaatcaggtatcgtt
tatatcggtgctgaagttactgctggtgacatcttagttggtaaagtaacgcctaaaggc
gaaactcagttaactcctgaagaaaaattgcttcgtgcaatctttggtgaaaaagctgct
gacgttaaagattcatctttacgtgttccatctggtactaaaggtacagttatcgacgtt
caagtcttcactcgtgatggcttagagaaagatgaccgtgcattagcgattgaaaaagca
cagcttgattcttaccgtaaagacttgaaagaagaatataaaatcttcgaagaagcggct
cgtgaacgtgtaatccgtttacttaaaggccaagagtctaatggcggtggttcaactaaa
cgtggcgataaactttctgaagatttattgtctggtttagagcttgttgatttacttgaa
attcaaccgacagatgaagcaatcgctgagcgtttaactcagattcaagtgttcttgaaa
gagaagagcgcagaaatcgatgagaaattcgctgagaagaaacgtaagcttgcaacaggt
gatgagctaacaactggcgtattgaaagttgttaaagtttacttagctgttaaacgtcgt
attcagcctggtgataagatggctggtcgtcatggtaacaagggtgttgtttctaacatc
ttacctgttgaagacatgccacacgatgcgaacggtgtacctgtagatatcgtattgaac
ccgttgggcgtaccatctcgtatgaacgtgggtcagattctcgagactcacttgggtatg
gcggctaaagggcttggtgacaaaatcgaaaaaatgttgaaagaacagcgtacagtttta
gaactacgtgaattcttagacaagatttataacaaagtcggtggcgagcaagaagatctt
gatagcttgactgatgatgaaatcctggcactttcaggcaacttgcgtgctggtgttcct
ttggctactcctgtatttgatggtgctgaagaaagtcaaattaaagatttacttgagttg
gctgacatttcacgtacaggtcaaacagtattgtttgatggacgtacaggtgaacagttt
gaccgtccagtaactgttggttacatgtacatgttgaagttgaaccacttggttgatgac
aagatgcatgcgcgttcaactggttcgtactcattagttacacaacaaccgcttggtggt
aaagcacaattcggtggtcagcgtttcggtgagatggaagtatgggcacttgaagcatac
ggtgcagcatatacactccaagaaatgctcacagtgaaatcggatgacgttgaaggccgt
actcgcatctataagaatattgtagatggtaaccattatatggatccgggtatgcctgaa
tcgttcaacgtattgaccaaagagatccgttctttaggtatcaacattgaactgaaaaat
ggtgattaa
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integrated database retrieval system
